RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 GNA13Q14344 377 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 GINS1Q14691 196 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 NDUFA9Q16795 377 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 GPAT3Q53EU6 434 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 GDPGP1Q6ZNW5 385 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 CCDC116Q8IYX3 515 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 LINC00471Q8N535 108 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 ZNF784Q8NCA9 323 aaPredicted RBP16.24■□□□□ 0.19
NEK3-206ENST00000611833 PROKR2Q8NFJ6 384 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 SLC30A2Q9BRI3 323 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 PHPT1Q9NRX4 125 aaPredicted RBP16.24■□□□□ 0.19
NEK3-206ENST00000611833 OBP2AQ9NY56 170 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 PLEKHM1Q9Y4G2 1056 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 A0A075B6Q4 140 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 PRR23AA6NEV1 266 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 C4orf51C9J302 202 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 PGRMC2O15173 223 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 HMGN2P05204 90 aaKnown RBP16.24■□□□□ 0.19
NEK3-206ENST00000611833 CHRM4P08173 479 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 HOXB3P14651 431 aaPredicted RBP16.24■□□□□ 0.19
NEK3-206ENST00000611833 RPS19P39019 145 aaKnown RBP16.24■□□□□ 0.19
NEK3-206ENST00000611833 AGERQ15109 404 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 ZNF750Q32MQ0 723 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 DESI1Q6ICB0 168 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 FAM109BQ6ICB4 259 aaPredicted RBP16.24■□□□□ 0.19
NEK3-206ENST00000611833 SFXN1Q9H9B4 322 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 TRPV4Q9HBA0 871 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 BCL2L10Q9HD36 194 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 GDE1Q9NZC3 331 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 FBXW2Q9UKT8 454 aa16.24■□□□□ 0.19
NEK3-206ENST00000611833 GUCY1B2O75343 617 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 SNX4O95219 450 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 LGI1O95970 557 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 APOA1P02647 267 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 GIPRP48546 466 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 PAQR6Q6TCH4 344 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 CD300LDQ6UXZ3 194 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 FAM26EQ8N5C1 309 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 OR2L8Q8NGY9 312 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 SUN3Q8TAQ9 357 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 LRR1Q96L50 414 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 PRRC1Q96M27 445 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 POLDIP3Q9BY77 421 aaKnown RBP16.23■□□□□ 0.19
NEK3-206ENST00000611833 PLA2G2FQ9BZM2 168 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 CERS4Q9HA82 394 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 SMURF1Q9HCE7 757 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 STUB1Q9UNE7 303 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 SSR3Q9UNL2 185 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 ENTPD4Q9Y227 616 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 ATG4BQ9Y4P1 393 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 ATG2AQ2TAZ0 1938 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 A0A1W2PR48 441 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 OR52A4PA6NMU1 304 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 WWP2O00308 870 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 HBQ1P09105 142 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 C8orf89P0DMQ9 161 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 HIST1H1TP22492 207 aaPredicted RBP16.23■□□□□ 0.19
NEK3-206ENST00000611833 TNFSF8P32971 234 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 TIE1P35590 1138 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 RORCP51449 518 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 LSM11P83369 360 aaKnown RBP eCLIP16.23■□□□□ 0.196e-7■□□□□ 10.5
NEK3-206ENST00000611833 UAP1L1Q3KQV9 507 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 TMEM64Q6YI46 380 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 USP30Q70CQ3 517 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 AKAP14Q86UN6 197 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 ACOT4Q8N9L9 421 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 IL17RCQ8NAC3 791 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 FLCNQ8NFG4 579 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 MS4A6EQ96DS6 147 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 RAB11FIP5Q9BXF6 653 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 C3orf14Q9HBI5 128 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 SNTG1Q9NSN8 517 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 MAN2C1Q9NTJ4 1040 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 ERVK13-1Q9NX77 482 aa16.23■□□□□ 0.19
NEK3-206ENST00000611833 MYO10Q9HD67 2058 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 A0A0G2JPF8 293 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 XIRP2A4UGR9 3374 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 HNRNPCL2B2RXH8 293 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 HNRNPCL3B7ZW38 293 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 EPPINO95925 133 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 HNRNPCL4P0DMR1 293 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 ENDOUP21128 410 aaKnown RBP16.22■□□□□ 0.19
NEK3-206ENST00000611833 PKLRP30613 574 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 CRYBB2P43320 205 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 HYAL2Q12891 473 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 MLLT11Q13015 90 aaPredicted RBP16.22■□□□□ 0.19
NEK3-206ENST00000611833 SELENBP1Q13228 472 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 ZIC1Q15915 447 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 SNAPC1Q16533 368 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 SYT14P1Q58G82 188 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 LIPKQ5VXJ0 399 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 ACSM5Q6NUN0 579 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 C1orf94Q6P1W5 598 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 TMEM107Q6UX40 140 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 CCBE1Q6UXH8 406 aaPredicted RBP16.22■□□□□ 0.19
NEK3-206ENST00000611833 OR52E1Q8NGJ3 308 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 SFXN5Q8TD22 340 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 C16orf58Q96GQ5 468 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 ABHD8Q96I13 439 aa16.22■□□□□ 0.19
NEK3-206ENST00000611833 QRSL1Q9H0R6 528 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms