RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 MED30Q96HR3 178 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 ATF6BQ99941 703 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 TMED9Q9BVK6 235 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 NIPAL2Q9H841 368 aa14.29□□□□□ -0.12
PCDHGB1-202ENST00000611598 MEN1O00255 615 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 LEFTY2O00292 366 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 DVL2O14641 736 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 PDPK1O15530 556 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 HOXA2O43364 376 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 PLOD3O60568 738 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 PRKAR1AP10644 381 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 ACP2P11117 423 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 ARSBP15848 533 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 DDCP20711 480 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 GABRA5P31644 462 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 PTGER1P34995 402 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 AGFG1P52594 562 aaKnown RBP14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 CTBP2P56545 445 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 ABATP80404 500 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 ALDH6A1Q02252 535 aaKnown RBP14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 MAP4K2Q12851 820 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 ZNF658BQ4V348 819 aaPredicted RBP14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 IKBIPQ70UQ0 350 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 SUN5Q8TC36 379 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 EXOSC8Q96B26 276 aaKnown RBP14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 CLIP3Q96DZ5 547 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 SCLYQ96I15 445 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 PRR14Q9BWN1 585 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 ZNF717Q9BY31 904 aaPredicted RBP14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 CCL26Q9Y258 94 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 A0A1W2PRQ8 180 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 TMEM129A0AVI4 362 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 WASHC1A8K0Z3 465 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 ISM1B1AKI9 464 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 QSOX1O00391 747 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 GRM6O15303 877 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 ARHGEF9O43307 516 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 PROM1O43490 865 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 MMP20O60882 483 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 EPPINO95925 133 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 SOD2P04179 222 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 CTSLP07711 333 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 SLC6A11P48066 632 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 MAPK12P53778 367 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 RRAS2P62070 204 aaPredicted RBP14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 SLC25A30Q5SVS4 291 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 MZT2BQ6NZ67 158 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 B3GLCTQ6Y288 498 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 MORN4Q8NDC4 146 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 OR8D4Q8NGM9 314 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 OR6T1Q8NGN1 323 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 OR9A1PQ8NGU1 263 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 XAGE5Q8WWM1 108 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 OR5P2Q8WZ92 322 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 AP2M1Q96CW1 435 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 QRFPRQ96P65 431 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 F2RL3Q96RI0 385 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 TMEM43Q9BTV4 400 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 FNDC11Q9BVV2 318 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 TBC1D17Q9HA65 648 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 RNF186Q9NXI6 227 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 GSTK1Q9Y2Q3 226 aa14.28□□□□□ -0.12
PCDHGB1-202ENST00000611598 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 ZSCAN5BA6NJL1 495 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 NEDD8-MDP1E9PL57 170 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 SOD1P00441 154 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 WEE1P30291 646 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 EVX1P49640 407 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 LRRC32Q14392 662 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 CCDC85BQ15834 202 aaPredicted RBP14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 KLHL22Q53GT1 634 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 FAM109AQ8N4B1 249 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 CYB5D2Q8WUJ1 264 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 SMPDL3AQ92484 453 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 MRPS31Q92665 395 aaKnown RBP14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 TM4SF18Q96CE8 201 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 ARHGAP9Q9BRR9 750 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 MARVELD1Q9BSK0 173 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 WACQ9BTA9 647 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 ING3Q9NXR8 418 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 SLC23A1Q9UHI7 598 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 C2orf92A0A1B0GVN3 265 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 PRODHO43272 600 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 FGF9P31371 208 aaPredicted RBP14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 MTNR1AP48039 350 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 UBE3AQ05086 875 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 RAB40BQ12829 278 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 GRIN2CQ14957 1233 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 CLEC12AQ5QGZ9 265 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 TMEM215Q68D42 235 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 CD200R1LQ6Q8B3 271 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 MARCH9Q86YJ5 346 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 TRAPPC5Q8IUR0 188 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 TBC1D19Q8N5T2 526 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 ZNF366Q8N895 744 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 DTX3Q8N9I9 347 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 SLC43A3Q8NBI5 491 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 ZNF485Q8NCK3 441 aa14.27□□□□□ -0.13
PCDHGB1-202ENST00000611598 ZNF607Q96SK3 696 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms