RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 JAM3Q9BX67 310 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 GAREM1Q9H706 876 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 PLEKHM1Q9Y4G2 1056 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 MEX3AA1L020 520 aaKnown RBP11.92□□□□□ -0.5
CTCFL-218ENST00000608440 OR6C74A6NCV1 312 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 I6L893 689 aaPredicted RBP11.92□□□□□ -0.5
CTCFL-218ENST00000608440 WNT9AO14904 365 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 SERPINA3P01011 423 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 MT-ND4P03905 459 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 OPN1SWP03999 348 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 GABRA1P14867 456 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 HOXB6P17509 224 aaKnown RBP11.92□□□□□ -0.5
CTCFL-218ENST00000608440 FDXRP22570 491 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 VEGFCP49767 419 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 RNF4P78317 190 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 TTLL4Q14679 1199 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 MARCH8Q5T0T0 291 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 EFCAB12Q6NXP0 572 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 CAMKVQ8NCB2 501 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 RHEBL1Q8TAI7 183 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 SNX33Q8WV41 574 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 C7orf34Q96L11 122 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 TOX2Q96NM4 488 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 C19orf43Q9BQ61 176 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 YIPF4Q9BSR8 244 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 MGAT4CQ9UBM8 478 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 GSTK1Q9Y2Q3 226 aa11.92□□□□□ -0.5
CTCFL-218ENST00000608440 IGKV6D-21A0A0A0MT36 114 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 SHISA3A0PJX4 238 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 ZNF593O00488 134 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-218ENST00000608440 FZD7O75084 574 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 LRATO95237 230 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 HEXBP07686 556 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 PRSS56P0CW18 603 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 MUC1P15941 1255 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-218ENST00000608440 NR0B1P51843 470 aaKnown RBP11.91□□□□□ -0.5
CTCFL-218ENST00000608440 BCL2L1Q07817 233 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 PDZK1IP1Q13113 114 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 HTR4Q13639 388 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 PON3Q15166 354 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 DUOXA1Q1HG43 343 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 VMACQ2NL98 169 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 ANKRD39Q53RE8 183 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 TMUB2Q71RG4 321 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 GATAD2BQ8WXI9 593 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 DUSP16Q9BY84 665 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 TMEM134Q9H6X4 195 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 KCNK12Q9HB15 430 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 EXOSC3Q9NQT5 275 aaKnown RBP11.91□□□□□ -0.5
CTCFL-218ENST00000608440 CA10Q9NS85 328 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 MARK1Q9P0L2 795 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 CLEC4AQ9UMR7 237 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 C2orf92A0A1B0GVN3 265 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 PSMD3O43242 534 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 ANXA9O76027 345 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 ZDHHC11BP0C7U3 371 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 ADCYAP1R1P41586 468 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 FABP9Q0Z7S8 132 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 MANEAQ5SRI9 462 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 IDNKQ5T6J7 187 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 GSG1LQ6UXU4 331 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 CBLL1Q75N03 491 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 ZDHHC17Q8IUH5 632 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 GPR26Q8NDV2 337 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 OR5M9Q8NGP3 310 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 RPLP0P6Q8NHW5 317 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 FAM193BQ96PV7 902 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-218ENST00000608440 NFKBIZQ9BYH8 718 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 TBC1D17Q9HA65 648 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 SERHLQ9NQF3 203 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 TMEM45AQ9NWC5 275 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 ACSL6Q9UKU0 697 aa11.91□□□□□ -0.5
CTCFL-218ENST00000608440 UBQLN1Q9UMX0 589 aaKnown RBP11.91□□□□□ -0.5
CTCFL-218ENST00000608440 CEP350Q5VT06 3117 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 WDR81Q562E7 1941 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 FXYD6-FXYD2A0A087WZ82 144 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 A0A0U1RQF3 1178 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 ABHD14A-ACY1A0A1B0GW23 586 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 SOX14O95416 240 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 IGFBP1P08833 259 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 ANXA8P13928 327 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 ACTR1BP42025 376 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 CTSOP43234 321 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 NCF4Q15080 339 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 FAM187BQ17R55 369 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 MFSD14CQ5VZR4 134 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 MZT2AQ6P582 158 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 FGD2Q7Z6J4 655 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 KRT77Q7Z794 578 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 TMEM17Q86X19 198 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 SIAH3Q8IW03 269 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 SPAG16Q8N0X2 631 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 RNF149Q8NC42 400 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 TMEM185AQ8NFB2 350 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 PROKR2Q8NFJ6 384 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 STK35Q8TDR2 534 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 SETD7Q8WTS6 366 aaKnown RBP11.9□□□□□ -0.5
CTCFL-218ENST00000608440 SSX3Q99909 188 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 TMED9Q9BVK6 235 aa11.9□□□□□ -0.5
CTCFL-218ENST00000608440 FXYD6Q9H0Q3 95 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms