RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 NR1H2P55055 460 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 ID2Q02363 134 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 SNTB1Q13884 538 aaKnown RBP5.74□□□□□ -1.49
CUX1-220ENST00000607092 ETFDHQ16134 617 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 BCL2A1Q16548 175 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 ACKR1Q16570 336 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 LIPJQ5W064 366 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 GRHL2Q6ISB3 625 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 ZNF793Q6ZN11 406 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 CXXC5Q7LFL8 322 aaKnown RBP5.74□□□□□ -1.49
CUX1-220ENST00000607092 VN1R5Q7Z5H4 357 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 YTHDF3Q7Z739 585 aaKnown RBP5.74□□□□□ -1.49
CUX1-220ENST00000607092 TBC1D1Q86TI0 1168 aaPredicted RBP5.74□□□□□ -1.49
CUX1-220ENST00000607092 CTAGE6Q86UF2 777 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 CXorf67Q86X51 503 aaPredicted RBP5.74□□□□□ -1.49
CUX1-220ENST00000607092 GRAMD2AQ8IUY3 354 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 OR14L1PQ8NHC6 308 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 KIF18AQ8NI77 898 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 TMCO6Q96DC7 493 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 MRRFQ96E11 262 aaKnown RBP5.74□□□□□ -1.49
CUX1-220ENST00000607092 WDYHV1Q96HA8 205 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 TMEM79Q9BSE2 394 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 LRRC1Q9BTT6 524 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 MED18Q9BUE0 208 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 GSX2Q9BZM3 304 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 CXorf56Q9H5V9 222 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 NMRAL1Q9HBL8 299 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 NMRK1Q9NWW6 199 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 GALNT8Q9NY28 637 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 MOCS1Q9NZB8 636 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 PRODH2Q9UF12 536 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 CHMP2BQ9UQN3 213 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 MRPS18CQ9Y3D5 142 aaKnown RBP5.74□□□□□ -1.49
CUX1-220ENST00000607092 TNPO3Q9Y5L0 923 aaKnown RBP5.74□□□□□ -1.49
CUX1-220ENST00000607092 TEX264Q9Y6I9 313 aa5.74□□□□□ -1.49
CUX1-220ENST00000607092 RTTNQ86VV8 2226 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 UQCRHLA0A096LP55 91 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 H0YIV9 168 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 H7C1Q1 480 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 FOXE1O00358 373 aaPredicted RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 RTCAO00442 366 aaKnown RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 EIF3HO15372 352 aaKnown RBP eCLIP5.73□□□□□ -1.49
CUX1-220ENST00000607092 TAPBPO15533 448 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 CTIFO43310 598 aaKnown RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 PPM1BO75688 479 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 SEMA3DO95025 777 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 TGFB1P01137 390 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 GSTA2P09210 222 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 FAM58BPP0C7Q3 252 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 FCGR2AP12318 317 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 CD1DP15813 335 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 PORP16435 677 aaPredicted RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 TCP1P17987 556 aaKnown RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 CRYGSP22914 178 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 ABCD3P28288 659 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 MAPK1P28482 360 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 PTPN6P29350 595 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 SRD5A2P31213 254 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 GP5P40197 560 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 CD79BP40259 229 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 RAB10P61026 200 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 OCRLQ01968 901 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 FUT7Q11130 342 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 CBLBQ13191 982 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 EFR3AQ14156 821 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 KBTBD12Q3ZCT8 623 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 TRMT10BQ6PF06 316 aaKnown RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 ANGPTL8Q6UXH0 198 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 PLEKHM3Q6ZWE6 761 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 CYS1Q717R9 158 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 Q71RC1 249 aaPredicted RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 P4HA3Q7Z4N8 544 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 UBE3DQ7Z6J8 389 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 ADGRE4PQ86SQ3 457 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 LUZP2Q86TE4 346 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 IFNEQ86WN2 208 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 MYLK4Q86YV6 388 aaPredicted RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 OR4N5Q8IXE1 308 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 SAMD14Q8IZD0 417 aaPredicted RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 MEIOBQ8N635 442 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 FAM83FQ8NEG4 500 aaPredicted RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 OR4K14Q8NGD5 310 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 HUS1BQ8NHY5 278 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 RHEBL1Q8TAI7 183 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 UBTD2Q8WUN7 234 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 TMEM171Q8WVE6 324 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 ANKRD49Q8WVL7 239 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 PPWD1Q96BP3 646 aaKnown RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 ERP27Q96DN0 273 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 UBXN10Q96LJ8 280 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 Q96MF0 132 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 GNRHR2Q96P88 292 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 OSBPL9Q96SU4 736 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 SERPINI1Q99574 410 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 CPNE1Q99829 537 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 WDR83Q9BRX9 315 aaKnown RBP5.73□□□□□ -1.49
CUX1-220ENST00000607092 OSBPL11Q9BXB4 747 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 SHCBP1LQ9BZQ2 653 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 OR2B2Q9GZK3 357 aa5.73□□□□□ -1.49
CUX1-220ENST00000607092 OR10A5Q9H207 317 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms