RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CSTAP01040 98 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 STSP08842 583 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 GPR4P46093 362 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 PRRT3Q5FWE3 981 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 MS4A13Q5J8X5 152 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 TMEM107Q6UX40 140 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 CHDHQ8NE62 594 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-217ENST00000602723 MSLNLQ96KJ4 702 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 ECM29Q5VYK3 1845 aa9.19□□□□□ -0.94
CSMD1-217ENST00000602723 NCS1P62166 190 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 TMEM225Q6GV28 225 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 SLC18B1Q6NT16 456 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 PRSS48Q7RTY5 328 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 SLC15A4Q8N697 577 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 ZFP41Q8N8Y5 198 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 SLA2Q9H6Q3 261 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 SERTAD3Q9UJW9 196 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 LAMB4A4D0S4 1761 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 HLCSP50747 726 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 GPR143P51810 404 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 MALLQ13021 153 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 LRP8Q14114 963 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 AWAT2Q6E213 333 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 FAM46BQ96A09 425 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 NSUN5Q96P11 429 aaKnown RBP9.18□□□□□ -0.94
CSMD1-217ENST00000602723 TDP1Q9NUW8 608 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 PCDHGA2Q9Y5H1 932 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 HHLA1C9JL84 531 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 POLR1CO15160 346 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-217ENST00000602723 SOCS5O75159 536 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 LEPRP48357 1165 aaKnown RBP9.18□□□□□ -0.94
CSMD1-217ENST00000602723 FGFBP1Q14512 234 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 OR8J1Q8NGP2 316 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 PGAM5Q96HS1 289 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 GKN1Q9NS71 199 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 FOXD2O60548 495 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-217ENST00000602723 SPDEFO95238 335 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 HEXBP07686 556 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 TYRP1P17643 537 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 BDKRB2P30411 391 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 APOFQ13790 326 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 ACBD7Q8N6N7 88 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 SLAIN1Q8ND83 568 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 BORCS7Q96B45 105 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 BACE2Q9Y5Z0 518 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 FAM230AA0A1W2PPH8 454 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 CIB4A0PJX0 185 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 AKR1C2P52895 323 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 GALK2Q01415 458 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 LBX2Q6XYB7 198 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 GKN2Q86XP6 184 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 GDPD1Q8N9F7 314 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 C3orf58Q8NDZ4 430 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 NAALAD2Q9Y3Q0 740 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 AP1M2Q9Y6Q5 423 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 A0A1W2PQL4 384 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-217ENST00000602723 SOBPA7XYQ1 873 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 TSTD3H0UI37 97 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 KDELR3O43731 214 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 ATG12O94817 140 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 OR8U9P0C7N5 309 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 TYRP14679 529 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 SOX9P48436 509 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 RELL1Q8IUW5 271 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 RHEBL1Q8TAI7 183 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 GLYATL2Q8WU03 294 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 EPOP01588 193 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 RIDAP52758 137 aaKnown RBP9.18□□□□□ -0.94
CSMD1-217ENST00000602723 NFATC3Q12968 1075 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 GRB7Q14451 532 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 GDF6Q6KF10 455 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-217ENST00000602723 WDR53Q7Z5U6 358 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-217ENST00000602723 WDSUB1Q8N9V3 476 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 SYT14Q8NB59 555 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 ARNTL2Q8WYA1 636 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 TWNKQ96RR1 684 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 PITX2Q99697 317 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 TMEM45AQ9NWC5 275 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 ADAM18Q9Y3Q7 739 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 GMDSO60547 372 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 RAC2P15153 192 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 DYRK1AQ13627 763 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 C6orf89Q6UWU4 347 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 PQLC3Q8N755 202 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 OR2T35Q8NGX2 323 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 MED1Q15648 1581 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-217ENST00000602723 TP53I11O14683 189 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 RAB4AP20338 218 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 RPL35P42766 123 aaKnown RBP9.18□□□□□ -0.94
CSMD1-217ENST00000602723 CNIH2Q6PI25 160 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 GPR149Q86SP6 731 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 RCBTB1Q8NDN9 531 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 C7orf43Q8WVR3 580 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 CNTNAP3BQ96NU0 1288 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 DNAJC5Q9H3Z4 198 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 GPN2Q9H9Y4 310 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-217ENST00000602723 KCNK6Q9Y257 313 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 HSPE1-MOB4S4R3N1 261 aa9.18□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF860A6NHJ4 632 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 CD1DP15813 335 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms