RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 NAGAP17050 411 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 PTGDSP41222 190 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 CCNG1P51959 295 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 MAP4K2Q12851 820 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 PRICKLE4Q2TBC4 344 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 GGTA1PQ4G0N0 100 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 FLYWCH1Q4VC44 716 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 FAM219BQ5XKK7 198 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 CDC20BQ86Y33 519 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 PM20D2Q8IYS1 436 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 MMP21Q8N119 569 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 TRPC4APQ8TEL6 797 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 POM121Q96HA1 1249 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 VPS11Q9H270 941 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 EPB41L4BQ9H329 900 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 NINJ2Q9NZG7 142 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 JKAMPQ9P055 326 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 PCDHA9Q9Y5H5 950 aa16.43■□□□□ 0.22
CHMP2A-208ENST00000601220 NINQ8N4C6 2090 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 MBD3L4A6NDZ8 208 aaPredicted RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 MBD3L3A6NE82 208 aaPredicted RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 MBD3L5A6NJ08 208 aaPredicted RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 PPP6CO00743 305 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 DIAPH2O60879 1101 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 PPM1BO75688 479 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 SBK3P0C264 359 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 NT5EP21589 574 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 CASQ1P31415 396 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 TMED10P49755 219 aaKnown RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 NAGLUP54802 743 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 NRG3P56975 720 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 ETF1P62495 437 aaKnown RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 DUSP2Q05923 314 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 GALNT1Q10472 559 aaPredicted RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 UAP1Q16222 522 aaPredicted RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 WIPI1Q5MNZ9 446 aaPredicted RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 CCNYL2Q5T2Q4 361 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 C10orf62Q5T681 223 aaPredicted RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 SLC48A1Q6P1K1 146 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 FAM111BQ6SJ93 734 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 RELL1Q8IUW5 271 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 C17orf53Q8N3J3 647 aaPredicted RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 TMEM151AQ8N4L1 468 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 MBD3L2Q8NHZ7 208 aaPredicted RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 ATP6V1E2Q96A05 226 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 TM4SF18Q96CE8 201 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 CTHRC1Q96CG8 243 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 NODALQ96S42 347 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 FARSBQ9NSD9 589 aaKnown RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 MAT2BQ9NZL9 334 aa16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 FOXD3Q9UJU5 478 aaPredicted RBP16.42■□□□□ 0.22
CHMP2A-208ENST00000601220 AKAP6Q13023 2319 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 HRNRQ86YZ3 2850 aaPredicted RBP16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 IL2RAP01589 272 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 ATP1B1P05026 303 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 RBP1P09455 135 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 MASP1P48740 699 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 RPS27LQ71UM5 84 aaKnown RBP16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 COMMD6Q7Z4G1 85 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 FAM83FQ8NEG4 500 aaPredicted RBP16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 OR4F6Q8NGB9 312 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 SLC44A1Q8WWI5 657 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 ABTB1Q969K4 478 aaPredicted RBP16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 ZNF681Q96N22 645 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 LRRC1Q9BTT6 524 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 CALHM2Q9HA72 323 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 AHSPQ9NZD4 102 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 XPR1Q9UBH6 696 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 MTRF1LQ9UGC7 380 aaKnown RBP16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 ZNF225Q9UK10 706 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 CAMK2AQ9UQM7 478 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 PLEKHA6Q9Y2H5 1048 aa16.41■□□□□ 0.22
CHMP2A-208ENST00000601220 C1orf226A1L170 272 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 GNB5O14775 395 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 SNPHO15079 494 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 ICOSLGO75144 302 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 CBX7O95931 251 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 RPS17P08708 135 aaKnown RBP16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 CTSSP25774 331 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 FEN1P39748 380 aaKnown RBP16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 SLCO1A2P46721 670 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 AGFG1P52594 562 aaKnown RBP16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 MAPK12P53778 367 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 RPP38P78345 283 aaKnown RBP16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 EXOSC7Q15024 291 aaKnown RBP16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 CEBPEQ15744 281 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 SGO1Q5FBB7 561 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 SYT10Q6XYQ8 523 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 PAGE2Q7Z2X7 111 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 NUP54Q7Z3B4 507 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 MILR1Q7Z6M3 343 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 ADGRE4PQ86SQ3 457 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 YRDCQ86U90 279 aaKnown RBP16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 VWA5B2Q8N398 1253 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 C9orf106Q8NAJ2 232 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 CHDHQ8NE62 594 aaPredicted RBP16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 OR1J4Q8NGS1 313 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 ZPLD1Q8TCW7 415 aa16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 ZNF483Q8TF39 744 aaPredicted RBP16.4■□□□□ 0.22
CHMP2A-208ENST00000601220 HSPBAP1Q96EW2 488 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms