RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 C2orf92A0A1B0GVN3 265 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 KLRC4-KLRK1H3BQV0 150 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 BCAS2O75934 225 aaPredicted RBP14.94□□□□□ -0.02
LSM4-206ENST00000600289 FBXO45P0C2W1 286 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 LINC00032P0C843 101 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 SDC1P18827 310 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 ABCE1P61221 599 aaKnown RBP14.94□□□□□ -0.02
LSM4-206ENST00000600289 PMP22Q01453 160 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 ELOAQ14241 798 aaKnown RBP14.94□□□□□ -0.02
LSM4-206ENST00000600289 MAPKAPK3Q16644 382 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 ZNF791Q3KP31 576 aaPredicted RBP14.94□□□□□ -0.02
LSM4-206ENST00000600289 RFTN2Q52LD8 501 aaPredicted RBP14.94□□□□□ -0.02
LSM4-206ENST00000600289 IL20RBQ6UXL0 311 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 MDGA2Q7Z553 956 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 DDIASQ8IXT1 998 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 ZFP62Q8NB50 900 aaPredicted RBP14.94□□□□□ -0.02
LSM4-206ENST00000600289 ADIPOR1Q96A54 375 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 EXOSC8Q96B26 276 aaKnown RBP14.94□□□□□ -0.02
LSM4-206ENST00000600289 PPP3R2Q96LZ3 170 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 BRINP2Q9C0B6 783 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 SH2D2AQ9NP31 389 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 MIEF1Q9NQG6 463 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 PFDN4Q9NQP4 134 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 RAP2CQ9Y3L5 183 aa14.94□□□□□ -0.02
LSM4-206ENST00000600289 ZGRF1Q86YA3 2104 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 TMEM120BA0PK00 339 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 WDR91A4D1P6 747 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 ITM2AO43736 263 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 HSPA4LO95757 839 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 CBX7O95931 251 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 GPX3P22352 226 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 TACR1P25103 407 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 MST1P26927 711 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 MPIP34949 423 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 ASMTP46597 345 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 MAGOHP61326 146 aaKnown RBP14.93□□□□□ -0.02
LSM4-206ENST00000600289 RPL38P63173 70 aaKnown RBP14.93□□□□□ -0.02
LSM4-206ENST00000600289 DUSP8Q13202 625 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 AGBL2Q5U5Z8 902 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 FAM111BQ6SJ93 734 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 BNC2Q6ZN30 1099 aaPredicted RBP14.93□□□□□ -0.02
LSM4-206ENST00000600289 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.93□□□□□ -0.02
LSM4-206ENST00000600289 SIAH3Q8IW03 269 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 SULF2Q8IWU5 870 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 FAM9CQ8IZT9 166 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 TAGAPQ8N103 731 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 C16orf52Q8NHV5 167 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 RAB3IL1Q8TBN0 382 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 DOK4Q8TEW6 326 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 MTERF3Q96E29 417 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 SPACA9Q96E40 222 aaPredicted RBP14.93□□□□□ -0.02
LSM4-206ENST00000600289 GAL3ST4Q96RP7 486 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 PCNX1Q96RV3 2341 aa14.93□□□□□ -0.02
LSM4-206ENST00000600289 PEX1O43933 1283 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 PLOD3O60568 738 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 LYPLA1O75608 230 aaPredicted RBP14.92□□□□□ -0.02
LSM4-206ENST00000600289 H2AFXP16104 143 aaPredicted RBP14.92□□□□□ -0.02
LSM4-206ENST00000600289 BGNP21810 368 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 MAPK1P28482 360 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 SLC1A6P48664 564 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 MEOX1P50221 254 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 WDR4P57081 412 aaKnown RBP14.92□□□□□ -0.02
LSM4-206ENST00000600289 DCAF7P61962 342 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 ALDH6A1Q02252 535 aaKnown RBP14.92□□□□□ -0.02
LSM4-206ENST00000600289 PDE7AQ13946 482 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 LTB4RQ15722 352 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 NTRK2Q16620 822 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 SMU1Q2TAY7 513 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 KRTCAP3Q53RY4 240 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 HHATQ5VTY9 493 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 HLA-DQA1Q5Y7H0 255 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 FAM180BQ6P0A1 224 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 CCDC116Q8IYX3 515 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 LRRC34Q8IZ02 419 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 CPSF7Q8N684 471 aaKnown RBP14.92□□□□□ -0.02
LSM4-206ENST00000600289 ZNF781Q8N8C0 355 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 AGR3Q8TD06 166 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 PAQR8Q8TEZ7 354 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 EGLN2Q96KS0 407 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 GPR137Q96N19 417 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 SORT1Q99523 831 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 C20orf27Q9GZN8 174 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 VIPAS39Q9H9C1 493 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 SACM1LQ9NTJ5 587 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 ARGLU1Q9NWB6 273 aaPredicted RBP14.92□□□□□ -0.02
LSM4-206ENST00000600289 PRODH2Q9UF12 536 aa14.92□□□□□ -0.02
LSM4-206ENST00000600289 A0A087WV62 115 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 CAPN14A8MX76 684 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 PRF1P14222 555 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 PCSK2P16519 638 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 ZNF24P17028 368 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 NAGAP17050 411 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 TMED10P49755 219 aaKnown RBP14.91□□□□□ -0.02
LSM4-206ENST00000600289 EMDP50402 254 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 RPL14P50914 215 aaKnown RBP14.91□□□□□ -0.02
LSM4-206ENST00000600289 PSPHP78330 225 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 STX3Q13277 289 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 PRSS53Q2L4Q9 553 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 GALNTL6Q49A17 601 aa14.91□□□□□ -0.02
LSM4-206ENST00000600289 ATP6AP1LQ52LC2 224 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms