RNA–Protein interactions for RNA: ENST00000598871.5

CALM3-211, Transcript of calmodulin 3, humanhuman

TSL 4 BASIC

Gene CALM3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-211ENST00000598871 NSUN5P2Q63ZY6 315 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 TIGD3Q6B0B8 471 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 C8orf74Q6P047 294 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 SLC48A1Q6P1K1 146 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 COMMD6Q7Z4G1 85 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 MILR1Q7Z6M3 343 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 PRR22Q8IZ63 422 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 OR4F6Q8NGB9 312 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 RNASE6Q93091 150 aaKnown RBP16.06■□□□□ 0.16
CALM3-211ENST00000598871 TMEM41AQ96HV5 264 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 FOXC2Q99958 501 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 NXF5Q9H1B4 397 aaKnown RBP16.06■□□□□ 0.16
CALM3-211ENST00000598871 CXXC4Q9H2H0 198 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 CLEC4MQ9H2X3 399 aaPredicted RBP16.06■□□□□ 0.16
CALM3-211ENST00000598871 RASSF1Q9NS23 344 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 DTX4Q9Y2E6 619 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 SLC6A5Q9Y345 797 aa16.06■□□□□ 0.16
CALM3-211ENST00000598871 A0A1B0GTL3 188 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 C1orf226A1L170 272 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 GOLGA6L10A6NI86 522 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 IL2RAP01589 272 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 ATP1B1P05026 303 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 RPS17P08708 135 aaKnown RBP16.05■□□□□ 0.16
CALM3-211ENST00000598871 COL6A2P12110 1019 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 BMP7P18075 431 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 CKAP4Q07065 602 aaKnown RBP16.05■□□□□ 0.16
CALM3-211ENST00000598871 GALNT1Q10472 559 aaPredicted RBP16.05■□□□□ 0.16
CALM3-211ENST00000598871 MAP4K2Q12851 820 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 TSNAXIP1Q2TAA8 658 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 PRICKLE4Q2TBC4 344 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 EIPR1Q53HC9 387 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 TMEM81Q6P7N7 255 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 VWA5B2Q8N398 1253 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 FAM222BQ8WU58 562 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 LRRC46Q96FV0 321 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 WDYHV1Q96HA8 205 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 GPATCH1Q9BRR8 931 aaKnown RBP16.05■□□□□ 0.16
CALM3-211ENST00000598871 UGT2B28Q9BY64 529 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 FARSBQ9NSD9 589 aaKnown RBP16.05■□□□□ 0.16
CALM3-211ENST00000598871 CCM2LQ9NUG4 571 aaPredicted RBP16.05■□□□□ 0.16
CALM3-211ENST00000598871 MTRF1LQ9UGC7 380 aaKnown RBP16.05■□□□□ 0.16
CALM3-211ENST00000598871 FETUBQ9UGM5 382 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 ZNF639Q9UID6 485 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 FOXD3Q9UJU5 478 aaPredicted RBP16.05■□□□□ 0.16
CALM3-211ENST00000598871 SLC12A4Q9UP95 1085 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 CAMK2AQ9UQM7 478 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 CFL2Q9Y281 166 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 NINQ8N4C6 2090 aa16.05■□□□□ 0.16
CALM3-211ENST00000598871 ZNF469Q96JG9 3925 aaPredicted RBP16.04■□□□□ 0.16
CALM3-211ENST00000598871 NIPBLQ6KC79 2804 aaeCLIP16.04■□□□□ 0.165e-8■■□□□ 13
CALM3-211ENST00000598871 CD8B2A6NJW9 211 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 A6NNC1 897 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 PPP6CO00743 305 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 PPM1BO75688 479 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 OTCP00480 354 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 KRT15P19012 456 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 CSNK2A2P19784 350 aaPredicted RBP16.04■□□□□ 0.16
CALM3-211ENST00000598871 PTPN6P29350 595 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 DEKP35659 375 aaKnown RBP16.04■□□□□ 0.16
CALM3-211ENST00000598871 FEN1P39748 380 aaKnown RBP16.04■□□□□ 0.16
CALM3-211ENST00000598871 SERPINB9P50453 376 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 ZNF136P52737 540 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 TOMM20Q15388 145 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 FLYWCH1Q4VC44 716 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 WIPI1Q5MNZ9 446 aaPredicted RBP16.04■□□□□ 0.16
CALM3-211ENST00000598871 FAM111BQ6SJ93 734 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 RPS27LQ71UM5 84 aaKnown RBP16.04■□□□□ 0.16
CALM3-211ENST00000598871 NUP54Q7Z3B4 507 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 MMP21Q8N119 569 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 ZNF483Q8TF39 744 aaPredicted RBP16.04■□□□□ 0.16
CALM3-211ENST00000598871 ABTB1Q969K4 478 aaPredicted RBP16.04■□□□□ 0.16
CALM3-211ENST00000598871 TM4SF18Q96CE8 201 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 CTHRC1Q96CG8 243 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 HSPBAP1Q96EW2 488 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 MRPL57Q9BQC6 102 aaKnown RBP16.04■□□□□ 0.16
CALM3-211ENST00000598871 LIME1Q9H400 295 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 METTL7AQ9H8H3 244 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 BRF2Q9HAW0 419 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 MAT2BQ9NZL9 334 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 ST6GALNAC2Q9UJ37 374 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 PSME2Q9UL46 239 aa16.04■□□□□ 0.16
CALM3-211ENST00000598871 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
CALM3-211ENST00000598871 PRRC2AP48634 2157 aaKnown RBP16.03■□□□□ 0.16
CALM3-211ENST00000598871 GNB5O14775 395 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 ACOX3O15254 700 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 ERAL1O75616 437 aaKnown RBP16.03■□□□□ 0.16
CALM3-211ENST00000598871 KRT38O76015 456 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 PDYNP01213 254 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 SOX18P35713 384 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 NAGLUP54802 743 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 EXOSC7Q15024 291 aaKnown RBP16.03■□□□□ 0.16
CALM3-211ENST00000598871 NNATQ16517 81 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 DCST1Q5T197 706 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 DESI1Q6ICB0 168 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 SLC30A6Q6NXT4 461 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 LETMD1Q6P1Q0 360 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 ANGPTL8Q6UXH0 198 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 TAOK1Q7L7X3 1001 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 TMEM151AQ8N4L1 468 aa16.03■□□□□ 0.16
CALM3-211ENST00000598871 SIMC1Q8NDZ2 872 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms