RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 RASSF2P50749 326 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 BNIP1Q12981 228 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 BIKQ13323 160 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 TLR1Q15399 786 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 INPP5JQ15735 1006 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 NKG7Q16617 165 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 TRMT5Q32P41 509 aaKnown RBP11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 SPDYE7PQ495Y7 208 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 NADK2Q4G0N4 442 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 FAM180BQ6P0A1 224 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 FAM199XQ6PEV8 388 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 SHISA6Q6ZSJ9 500 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 MED25Q71SY5 747 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 DHDDSQ86SQ9 333 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 SCUBE1Q8IWY4 988 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 OR4N5Q8IXE1 308 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 CLECL1Q8IZS7 167 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 TRIML2Q8N7C3 387 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 METTL21AQ8WXB1 218 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 OR5P2Q8WZ92 322 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 ANKRD9Q96BM1 317 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 ROPN1LQ96C74 230 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 CNRIP1Q96F85 164 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 PTCHD1Q96NR3 888 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 AMDHD1Q96NU7 426 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 DGAT2Q96PD7 388 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 CRB3Q9BUF7 120 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 EFHD1Q9BUP0 239 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 VN1R1Q9GZP7 353 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 SOX17Q9H6I2 414 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 SLC52A3Q9NQ40 469 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 SEMA3GQ9NS98 782 aa11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.26□□□□□ -0.61
SHKBP1-213ENST00000597325 DIDO1Q9BTC0 2240 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 ERICH4A6NGS2 130 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 VSTM2BA6NLU5 285 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 WASHC1A8K0Z3 465 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 MYO1GB0I1T2 1018 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 IDSB3KWA1 339 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 DYRK3O43781 588 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 ERN1O75460 977 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 SLITRK5O94991 958 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 UNC5CO95185 931 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 C6orf47O95873 294 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 NPPAP01160 153 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 IFNA16P05015 189 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 KRT16P08779 473 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 SLC35E2P0CK97 266 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 TCN2P20062 427 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 NT5EP21589 574 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 FOLR3P41439 243 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 FRKP42685 505 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 TRPC1P48995 793 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 WNT3P56703 355 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 PHC1P78364 1004 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 BTG2P78543 158 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 RHAGQ02094 409 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 MLC1Q15049 377 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 PRSS53Q2L4Q9 553 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 MPEG1Q2M385 716 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 ZNF750Q32MQ0 723 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 PAGE3Q5JUK9 113 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 SP5Q6BEB4 398 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 LCN10Q6JVE6 187 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 MRPL14Q6P1L8 145 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 C16orf89Q6UX73 402 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 ZNF517Q6ZMY9 492 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 SZRD1Q7Z422 152 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 CCDC116Q8IYX3 515 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 SHISA5Q8N114 240 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 DPP10Q8N608 796 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 ENDOVQ8N8Q3 282 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 CT55Q8WUE5 264 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 RBM18Q96H35 190 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 ZNF681Q96N22 645 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 ALOXE3Q9BYJ1 711 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 GLIPR2Q9H4G4 154 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 IL1RL2Q9HB29 575 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 SLAMF7Q9NQ25 335 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 TAS2R9Q9NYW1 312 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 C19orf25Q9UFG5 118 aaPredicted RBP11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 C3orf18Q9UK00 162 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 ITGB1BP2Q9UKP3 347 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 PTRH2Q9Y3E5 179 aaKnown RBP11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 SNX8Q9Y5X2 465 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 POLEQ07864 2286 aa11.25□□□□□ -0.61
SHKBP1-213ENST00000597325 C15orf38-AP3S2A0A0A6YYH1 394 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 B2RBV5 119 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 C21orf140B9A014 251 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 ALOX12BO75342 701 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 ATP1B1P05026 303 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 RAB40ALP0C0E4 278 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 T-ENOLP0DO92 83 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 STAT5AP42229 794 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 STT3AP46977 705 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 EMP2P54851 167 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 RPS15P62841 145 aaKnown RBP11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 HBA1P69905 142 aa11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 IGLV3-21P80748 117 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-213ENST00000597325 NSDHLQ15738 373 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms