RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 GALNT6Q8NCL4 622 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 SIMC1Q8NDZ2 872 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 OR52E4Q8NGH9 312 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 DOK4Q8TEW6 326 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 PTPMT1Q8WUK0 201 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 ADAMTS14Q8WXS8 1223 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 JADE3Q92613 823 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 HOXB13Q92826 284 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 RIT1Q92963 219 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 C16orf58Q96GQ5 468 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 RBM18Q96H35 190 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 MAGED4Q96JG8 741 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 MS4A4EQ96PG1 132 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 OR51I1Q9H343 314 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 GORASP2Q9H8Y8 452 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 A4GALTQ9NPC4 353 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 DDX18Q9NVP1 670 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 MKL2Q9ULH7 1088 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 SATB2Q9UPW6 733 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 PCDHGA8Q9Y5G5 932 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 SPEGQ15772 3267 aa13.76□□□□□ -0.21
SHKBP1-211ENST00000595945 SPTBN4Q9H254 2564 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 TCRBV3S1A0A5B6 114 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 AQP12BA6NM10 295 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 IDSB3KWA1 339 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 CXCR6O00574 342 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 ASNA1O43681 348 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 ENTPD5O75356 428 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 CLPSP04118 112 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 C8BP07358 591 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 NCK1P16333 377 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 POLE2P56282 527 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 FOXL2P58012 376 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 RIPK1Q13546 671 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 MAP7Q14244 749 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 LASP1Q14847 261 aaKnown RBP13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 MYBPC3Q14896 1274 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 ELAVL1Q15717 326 aaKnown RBP13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 MAPK11Q15759 364 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 ZNF630Q2M218 657 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 C3orf38Q5JPI3 329 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 MFSD4BQ5TF39 518 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 GLYATQ6IB77 296 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 MFSD12Q6NUT3 480 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 TNFAIP8L2Q6P589 184 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 FAM199XQ6PEV8 388 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 C6orf15Q6UXA7 325 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 ANGPTL8Q6UXH0 198 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 TIPARPQ7Z3E1 657 aaKnown RBP13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 AQP12AQ8IXF9 295 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 LGI4Q8N135 537 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 VWA5B2Q8N398 1253 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 C11orf65Q8NCR3 313 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 BHLHE22Q8NFJ8 381 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 MR1Q95460 341 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 ZNF578Q96N58 590 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 ACTRT3Q9BYD9 372 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 ADAP2Q9NPF8 381 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 FOXJ2Q9P0K8 574 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 BCAP29Q9UHQ4 241 aa13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 NXT1Q9UKK6 140 aaKnown RBP13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 FAF1Q9UNN5 650 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-211ENST00000595945 TEX51A0A1B0GUA7 166 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 TCRBV5S2A0A599 114 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 PRAMEF27A3QJZ7 478 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 C17orf105B2RV13 164 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 HRKO00198 91 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 GSTA4O15217 222 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 ALOX12BO75342 701 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 SOX11P35716 441 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 PRKAG1P54619 331 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 EMP2P54851 167 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 ZNF267Q14586 743 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 EXOSC7Q15024 291 aaKnown RBP13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 NCF4Q15080 339 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 NSDHLQ15738 373 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 MLIPQ5VWP3 458 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 CDC73Q6P1J9 531 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 ZCCHC12Q6PEW1 402 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 TMEM205Q6UW68 189 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 CYP2R1Q6VVX0 501 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 SHISA6Q6ZSJ9 500 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 LANCL3Q6ZV70 420 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 SZRD1Q7Z422 152 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 METTL25Q8N6Q8 603 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 GOLM1Q8NBJ4 401 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 RAB8BQ92930 207 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 MAL2Q969L2 176 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 DUS3LQ96G46 650 aaKnown RBP13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 OR7D2Q96RA2 312 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 TRIM15Q9C019 465 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 SOX17Q9H6I2 414 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 PNO1Q9NRX1 252 aaKnown RBP13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 THUMPD1Q9NXG2 353 aaKnown RBP13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 DLL3Q9NYJ7 618 aa13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 GPN3Q9UHW5 284 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-211ENST00000595945 C9J4A7 227 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 COQ9O75208 318 aa13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 GCM2O75603 506 aaPredicted RBP13.73□□□□□ -0.21
SHKBP1-211ENST00000595945 CREG1O75629 220 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms