RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 MS4A2Q01362 244 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 VAC14Q08AM6 782 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 KPNB1Q14974 876 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 LTB4RQ15722 352 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 CYP51A1Q16850 503 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 SAXO2Q658L1 398 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 QSOX2Q6ZRP7 698 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 SERPINA11Q86U17 422 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 TMPRSS12Q86WS5 348 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 DHFR2Q86XF0 187 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 CALHM3Q86XJ0 350 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 RNF130Q86XS8 419 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 ZC3H7AQ8IWR0 971 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 PRSS58Q8IYP2 241 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 ST13P4Q8IZP2 240 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 CACTIN-AS1Q8N1I8 211 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 NUP43Q8NFH3 380 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 STT3BQ8TCJ2 826 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 WDR60Q8WVS4 1066 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 MR1Q95460 341 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 ASB9Q96DX5 294 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 NEURL3Q96EH8 262 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 LRFN5Q96NI6 719 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 SPATA9Q9BWV2 254 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 ULBP3Q9BZM4 244 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 TGIF2Q9GZN2 237 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 PCDHAC1Q9H158 963 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 MUC13Q9H3R2 512 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 DENND2DQ9H6A0 471 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 EPS8L2Q9H6S3 715 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 NECTIN3Q9NQS3 549 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 SLC22A11Q9NSA0 550 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 PTGFRNQ9P2B2 879 aa12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 GMPR2Q9P2T1 348 aaKnown RBP12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 NUP214P35658 2090 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-209ENST00000595803 OR2W5A6NFC9 320 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 PLD2O14939 933 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 C1QCP02747 245 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 ALBP02768 609 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 HEXBP07686 556 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 ZGLP1P0C6A0 271 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 CCNYL3P0C7X3 344 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 MAOAP21397 527 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 MC3RP41968 323 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 STT3AP46977 705 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 GZMMP51124 257 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 CASP9P55211 416 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 OR4D2P58180 307 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 MAP4K2Q12851 820 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 FADDQ13158 208 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 TP53BP2Q13625 1128 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 FLOT2Q14254 428 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 ZNF628Q5EBL2 1059 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 ZNF385CQ66K41 422 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 CPZQ66K79 652 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 GLYATQ6IB77 296 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 ERICH5Q6P6B1 374 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 FAM111BQ6SJ93 734 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 COX15Q7KZN9 410 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 MICU2Q8IYU8 434 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 HIPK4Q8NE63 616 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 PLPP5Q8NEB5 264 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 ZNF675Q8TD23 568 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 DOK4Q8TEW6 326 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 RIT1Q92963 219 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 REXO5Q96IC2 774 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 SLC35G5Q96KT7 338 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 DDA1Q9BW61 102 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 TRIM15Q9C019 465 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 C14orf105Q9NVL8 296 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 DDX18Q9NVP1 670 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 EGFL7Q9UHF1 273 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 IL17BQ9UHF5 180 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 MKL2Q9ULH7 1088 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 FAF1Q9UNN5 650 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 USP22Q9UPT9 525 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 B3GALT1Q9Y5Z6 326 aa12.21□□□□□ -0.45
SHKBP1-209ENST00000595803 IGLV3-12A0A075B6K2 115 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 SYNDIG1LA6NDD5 238 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 A8MUI8 341 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 UPK1AO00322 258 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 ACOT8O14734 319 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 DYRK3O43781 588 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 BCAS2O75934 225 aaPredicted RBP12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 CD63P08962 238 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 IFI6P09912 130 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 ETFAP13804 333 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 GALNSP34059 522 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 MAGEA8P43361 318 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 EMP2P54851 167 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 DSTNP60981 165 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 ACTR3P61158 418 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 RHAGQ02094 409 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 TARDBPQ13148 414 aaKnown RBP eCLIP12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 NSDHLQ15738 373 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 PRICKLE4Q2TBC4 344 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 TRMT12Q53H54 448 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 C3orf38Q5JPI3 329 aa12.2□□□□□ -0.46
SHKBP1-209ENST00000595803 COX20Q5RI15 118 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms