RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 TAGAPQ8N103 731 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 LIX1Q8N485 282 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 FNDC5Q8NAU1 212 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 GOLM1Q8NBJ4 401 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 ST6GALNAC3Q8NDV1 305 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 KAT2AQ92830 837 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 TP53INP1Q96A56 240 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 PPCDCQ96CD2 204 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 SPACA9Q96E40 222 aaPredicted RBP13.45□□□□□ -0.26
VRK3-206ENST00000594090 SGCZQ96LD1 299 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 PPP1R36Q96LQ0 422 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 C1orf50Q9BV19 199 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 GLIPR2Q9H4G4 154 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 ANKRA2Q9H9E1 313 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 PNPOQ9NVS9 261 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 CFL2Q9Y281 166 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 ANKUB1A6NFN9 424 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 KLRC4-KLRK1H3BQV0 150 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 PDPK1O15530 556 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 TBX19O60806 448 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 FBXO45P0C2W1 286 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 MST1P26927 711 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 MEOX1P50221 254 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 GPR85P60893 370 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 ATG16L1Q676U5 607 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 SULF2Q8IWU5 870 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 TRIM42Q8IWZ5 723 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 DND1Q8IYX4 353 aaKnown RBP13.44□□□□□ -0.26
VRK3-206ENST00000594090 CPSF7Q8N684 471 aaKnown RBP13.44□□□□□ -0.26
VRK3-206ENST00000594090 GOLGA6L1Q8N7Z2 621 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 OR7G2Q8NG99 324 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 AMDHD1Q96NU7 426 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 ITPAQ9BY32 194 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 DEPPQ9NTK1 212 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 THAP1Q9NVV9 213 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 PRODH2Q9UF12 536 aa13.44□□□□□ -0.26
VRK3-206ENST00000594090 HMGB1P1B2RPK0 211 aaPredicted RBP13.43□□□□□ -0.26
VRK3-206ENST00000594090 SCAMP2O15127 329 aaKnown RBP13.43□□□□□ -0.26
VRK3-206ENST00000594090 PEX1O43933 1283 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 PLOD3O60568 738 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 BCAS2O75934 225 aaPredicted RBP13.43□□□□□ -0.26
VRK3-206ENST00000594090 SASH3O75995 380 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 SLITRK5O94991 958 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 CCL3P10147 92 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 PRPS2P11908 318 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 HPCAL1P37235 193 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 MC3RP41968 323 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 EMDP50402 254 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 NRG3P56975 720 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 MAD2L1Q13257 205 aaPredicted RBP13.43□□□□□ -0.26
VRK3-206ENST00000594090 ELOAQ14241 798 aaKnown RBP13.43□□□□□ -0.26
VRK3-206ENST00000594090 PTGR1Q14914 329 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 NNATQ16517 81 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 NTRK2Q16620 822 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 SMU1Q2TAY7 513 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 FHL5Q5TD97 284 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 IL23RQ5VWK5 629 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 POGLUT1Q8NBL1 392 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 CIDECQ96AQ7 238 aaPredicted RBP13.43□□□□□ -0.26
VRK3-206ENST00000594090 MTERF3Q96E29 417 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 NUF2Q9BZD4 464 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 NXF5Q9H1B4 397 aaKnown RBP13.43□□□□□ -0.26
VRK3-206ENST00000594090 MANSC1Q9H8J5 431 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 AKTIPQ9H8T0 292 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 SH2D2AQ9NP31 389 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 ASIC5Q9NY37 505 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 NOP53Q9NZM5 478 aaKnown RBP13.43□□□□□ -0.26
VRK3-206ENST00000594090 SH3BP4Q9P0V3 963 aa13.43□□□□□ -0.26
VRK3-206ENST00000594090 FASNP49327 2511 aaKnown RBP13.43□□□□□ -0.26
VRK3-206ENST00000594090 EXPH5Q8NEV8 1989 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 A0A087WV62 115 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 A0A0G2JMM0 328 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 A0A1W2PPB8 328 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 A0A1W2PRS3 328 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 KIR3DP1A8MWS1 328 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 ZNF24P17028 368 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 ABCD3P28288 659 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 FRKP42685 505 aaPredicted RBP13.42□□□□□ -0.26
VRK3-206ENST00000594090 TMED10P49755 219 aaKnown RBP13.42□□□□□ -0.26
VRK3-206ENST00000594090 OCRLQ01968 901 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 ALDH6A1Q02252 535 aaKnown RBP13.42□□□□□ -0.26
VRK3-206ENST00000594090 EMX2Q04743 252 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 TMEM107Q6UX40 140 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 TMEM64Q6YI46 380 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 R3HCC1LQ7Z5L2 792 aaKnown RBP13.42□□□□□ -0.26
VRK3-206ENST00000594090 ZFP62Q8NB50 900 aaPredicted RBP13.42□□□□□ -0.26
VRK3-206ENST00000594090 FAM13CQ8NE31 585 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 OR10G3Q8NGC4 313 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 PAQR8Q8TEZ7 354 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 LCORQ96JN0 433 aaPredicted RBP13.42□□□□□ -0.26
VRK3-206ENST00000594090 BTBD9Q96Q07 612 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 MEAF6Q9HAF1 191 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 SACM1LQ9NTJ5 587 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 ATP6V1HQ9UI12 483 aa13.42□□□□□ -0.26
VRK3-206ENST00000594090 EIF3LQ9Y262 564 aaKnown RBP13.42□□□□□ -0.26
VRK3-206ENST00000594090 PINLYPA6NC86 204 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 FRG2CA6NGY1 282 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 CAPN14A8MX76 684 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 G3V3Y1 287 aa13.41□□□□□ -0.26
VRK3-206ENST00000594090 PLOD2O00469 737 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms