RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 DEKP35659 375 aaKnown RBP17.27■□□□□ 0.36
CCDC43-205ENST00000592333 MASP1P48740 699 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 DLX5P56178 289 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 FBXW4P57775 412 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 PRICKLE4Q2TBC4 344 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 ACSF3Q4G176 576 aaPredicted RBP17.27■□□□□ 0.36
CCDC43-205ENST00000592333 LGSNQ5TDP6 509 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 FNDC7Q5VTL7 733 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 NSUN5P2Q63ZY6 315 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 TIGD3Q6B0B8 471 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 SLC30A6Q6NXT4 461 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 COMMD6Q7Z4G1 85 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 WDR53Q7Z5U6 358 aaPredicted RBP17.27■□□□□ 0.36
CCDC43-205ENST00000592333 VWA5B2Q8N398 1253 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 MMGT1Q8N4V1 131 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 OR4F6Q8NGB9 312 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 UCN3Q969E3 161 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 CTHRC1Q96CG8 243 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 ERP27Q96DN0 273 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 DTNBP1Q96EV8 351 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 PAFAH2Q99487 392 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 FAIM2Q9BWQ8 316 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 MRPL1Q9BYD6 325 aaKnown RBP17.27■□□□□ 0.36
CCDC43-205ENST00000592333 CDC42EP4Q9H3Q1 356 aaKnown RBP17.27■□□□□ 0.36
CCDC43-205ENST00000592333 ZNF358Q9NW07 568 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 ZNF639Q9UID6 485 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 ARHGAP21Q5T5U3 1957 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 C2CD3Q4AC94 2353 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 NINQ8N4C6 2090 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 CD8B2A6NJW9 211 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 PPM1BO75688 479 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 TRAPPC6AO75865 159 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 BCAS2O75934 225 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-205ENST00000592333 ACTL6AO96019 429 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 ABCB1P08183 1280 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-205ENST00000592333 KIR2DL3P43628 341 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 ASCL1P50553 236 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 GLE1Q53GS7 698 aaKnown RBP17.26■□□□□ 0.35
CCDC43-205ENST00000592333 SEM1Q6ZVN7 128 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 SAMD14Q8IZD0 417 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-205ENST00000592333 DOK4Q8TEW6 326 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 ZNF483Q8TF39 744 aaPredicted RBP17.26■□□□□ 0.35
CCDC43-205ENST00000592333 FMO2Q99518 471 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 SHCBP1LQ9BZQ2 653 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 CALHM2Q9HA72 323 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 PRODH2Q9UF12 536 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 TRPS1Q9UHF7 1281 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 SLC12A4Q9UP95 1085 aa17.26■□□□□ 0.35
CCDC43-205ENST00000592333 ANKHD1Q8IWZ3 2542 aaKnown RBP17.26■□□□□ 0.35
CCDC43-205ENST00000592333 GOSR1O95249 250 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 ACSL3O95573 720 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 DRD5P21918 477 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 DNAJA1P31689 397 aaKnown RBP17.25■□□□□ 0.35
CCDC43-205ENST00000592333 GCKP35557 465 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 TRPC1P48995 793 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 MGAT2Q10469 447 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 GALNT1Q10472 559 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-205ENST00000592333 FAM222BQ8WU58 562 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 SELENOMQ8WWX9 145 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 RNASE6Q93091 150 aaKnown RBP17.25■□□□□ 0.35
CCDC43-205ENST00000592333 TM4SF18Q96CE8 201 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 LCORQ96JN0 433 aaPredicted RBP17.25■□□□□ 0.35
CCDC43-205ENST00000592333 NSUN5Q96P11 429 aaKnown RBP17.25■□□□□ 0.35
CCDC43-205ENST00000592333 GNRHR2Q96P88 292 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 FOXC2Q99958 501 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 CXXC4Q9H2H0 198 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 MAT2BQ9NZL9 334 aa17.25■□□□□ 0.35
CCDC43-205ENST00000592333 MED13LQ71F56 2210 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 NCKAP5O14513 1909 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 A0A1W2PS29 197 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 TO15178 435 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 IL18BPO95998 194 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 PDYNP01213 254 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 SNRPAP09012 282 aaKnown RBP17.24■□□□□ 0.35
CCDC43-205ENST00000592333 PTPN6P29350 595 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 PPICP45877 212 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 SCIMPQ6UWF3 145 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 TMEM64Q6YI46 380 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 TMEM151AQ8N4L1 468 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 MNS1Q8NEH6 495 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 OR1J4Q8NGS1 313 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 ZPLD1Q8TCW7 415 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 MTBPQ96DY7 904 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 SH3GL2Q99962 352 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 NXF5Q9H1B4 397 aaKnown RBP17.24■□□□□ 0.35
CCDC43-205ENST00000592333 METTL7AQ9H8H3 244 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 DNAJB12Q9NXW2 375 aaKnown RBP17.24■□□□□ 0.35
CCDC43-205ENST00000592333 VPS29Q9UBQ0 182 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 NFU1Q9UMS0 254 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 STK38LQ9Y2H1 464 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 ZNF780BQ9Y6R6 833 aa17.24■□□□□ 0.35
CCDC43-205ENST00000592333 A0A087WUV0 522 aaPredicted RBP17.23■□□□□ 0.35
CCDC43-205ENST00000592333 MBD3L4A6NDZ8 208 aaPredicted RBP17.23■□□□□ 0.35
CCDC43-205ENST00000592333 MBD3L3A6NE82 208 aaPredicted RBP17.23■□□□□ 0.35
CCDC43-205ENST00000592333 MBD3L5A6NJ08 208 aaPredicted RBP17.23■□□□□ 0.35
CCDC43-205ENST00000592333 CBR3O75828 277 aa17.23■□□□□ 0.35
CCDC43-205ENST00000592333 KRT6AP02538 564 aa17.23■□□□□ 0.35
CCDC43-205ENST00000592333 KRT6BP04259 564 aa17.23■□□□□ 0.35
CCDC43-205ENST00000592333 DRD2P14416 443 aa17.23■□□□□ 0.35
CCDC43-205ENST00000592333 CPN1P15169 458 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms