RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SLC28A1O00337 649 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 CHRNGP07510 517 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 PCSK2P16519 638 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 PIGAP37287 484 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 KIAA0040Q15053 153 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 TRMT12Q53H54 448 aaKnown RBP25.07■■□□□ 1.6
SMAD4-213ENST00000591914 ZNF628Q5EBL2 1059 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 ARL13AQ5H913 290 aaPredicted RBP25.07■■□□□ 1.6
SMAD4-213ENST00000591914 FAM71E1Q6IPT2 247 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 NOXRED1Q6NXP6 359 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 TMEM64Q6YI46 380 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 TUBB1Q9H4B7 451 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 PFDN4Q9NQP4 134 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 TUBA8Q9NY65 449 aaPredicted RBP25.07■■□□□ 1.6
SMAD4-213ENST00000591914 BCAP29Q9UHQ4 241 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 CNOT11Q9UKZ1 510 aaKnown RBP25.07■■□□□ 1.6
SMAD4-213ENST00000591914 DNAJC15Q9Y5T4 150 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 NPFFR2Q9Y5X5 522 aa25.07■■□□□ 1.6
SMAD4-213ENST00000591914 A0A1B0GTH9 108 aa25.06■■□□□ 1.6
SMAD4-213ENST00000591914 CDC40O60508 579 aaKnown RBP eCLIP25.06■■□□□ 1.6
SMAD4-213ENST00000591914 FGF4P08620 206 aa25.06■■□□□ 1.6
SMAD4-213ENST00000591914 ETV4P43268 484 aa25.06■■□□□ 1.6
SMAD4-213ENST00000591914 NRG3P56975 720 aa25.06■■□□□ 1.6
SMAD4-213ENST00000591914 MRPS35P82673 323 aaKnown RBP25.06■■□□□ 1.6
SMAD4-213ENST00000591914 C2orf80Q0P641 193 aa25.06■■□□□ 1.6
SMAD4-213ENST00000591914 HIST2H2BCQ6DN03 193 aa25.06■■□□□ 1.6
SMAD4-213ENST00000591914 HOMEZQ8IX15 550 aa25.06■■□□□ 1.6
SMAD4-213ENST00000591914 ERP27Q96DN0 273 aa25.06■■□□□ 1.6
SMAD4-213ENST00000591914 NXF5Q9H1B4 397 aaKnown RBP25.06■■□□□ 1.6
SMAD4-213ENST00000591914 PROK2Q9HC23 129 aa25.06■■□□□ 1.6
SMAD4-213ENST00000591914 GIMAP4Q9NUV9 329 aa25.06■■□□□ 1.6
SMAD4-213ENST00000591914 ENTPD4Q9Y227 616 aa25.06■■□□□ 1.6
SMAD4-213ENST00000591914 CAPN14A8MX76 684 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 RGS16O15492 202 aaPredicted RBP25.05■■□□□ 1.6
SMAD4-213ENST00000591914 RGS14O43566 566 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 SEC22BO75396 215 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 CHEK2O96017 543 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 NEFHP12036 1026 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 TMED10P49755 219 aaKnown RBP25.05■■□□□ 1.6
SMAD4-213ENST00000591914 EMDP50402 254 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 RPS6KA2Q15349 733 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 PRAMEF20Q5VT98 475 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 ARHGAP11AQ6P4F7 1023 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 Q6ZSR9 355 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 ZCCHC23Q6ZST2 131 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 IKBIPQ70UQ0 350 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 DOLPP1Q86YN1 238 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 FAM109AQ8N4B1 249 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 TMEM251Q8N6I4 163 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 OR52R1Q8NGF1 315 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 OR5M3Q8NGP4 307 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 OR9A2Q8NGT5 310 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 OR2T11Q8NH01 316 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 CDC26Q8NHZ8 85 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 ITPAQ9BY32 194 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 DEFB127Q9H1M4 99 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 LRTM1Q9HBL6 345 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 EML4Q9HC35 981 aaKnown RBP25.05■■□□□ 1.6
SMAD4-213ENST00000591914 C1orf109Q9NX04 203 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 TAS2R7Q9NYW3 318 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 EXO1Q9UQ84 846 aaKnown RBP25.05■■□□□ 1.6
SMAD4-213ENST00000591914 FIS1Q9Y3D6 152 aa25.05■■□□□ 1.6
SMAD4-213ENST00000591914 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.05■■□□□ 1.6
SMAD4-213ENST00000591914 EXPH5Q8NEV8 1989 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 ANKRD33BA6NCL7 494 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 PDE9AO76083 593 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 BPGMP07738 259 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 ABCD3P28288 659 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 PTGS2P35354 604 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 SERPINB5P36952 375 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 FBXW4P57775 412 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 KCNJ2P63252 427 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 PRSS53Q2L4Q9 553 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 UGT3A2Q3SY77 523 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 TICAM1Q8IUC6 712 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 OR6Y1Q8NGX8 325 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 FAM57AQ8TBR7 257 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 ITLN2Q8WWU7 325 aaPredicted RBP25.04■■□□□ 1.6
SMAD4-213ENST00000591914 FCRL1Q96LA6 429 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 SECISBP2Q96T21 854 aaKnown RBP25.04■■□□□ 1.6
SMAD4-213ENST00000591914 MIEF1Q9NQG6 463 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 PRODH2Q9UF12 536 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 MEMO1Q9Y316 297 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 TRAF6Q9Y4K3 522 aa25.04■■□□□ 1.6
SMAD4-213ENST00000591914 MYO1GB0I1T2 1018 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 TMEM233B4DJY2 109 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 PRRG2O14669 202 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 TP53I11O14683 189 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 BCAS2O75934 225 aaPredicted RBP25.03■■□□□ 1.6
SMAD4-213ENST00000591914 IGHG3P01860 377 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 ARRB2P32121 409 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 MPIP34949 423 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 MAGEA5P43359 124 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 PAOXQ6QHF9 649 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 RPTNQ6XPR3 784 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 CLYBLQ8N0X4 340 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 LCORQ96JN0 433 aaPredicted RBP25.03■■□□□ 1.6
SMAD4-213ENST00000591914 PHF12Q96QT6 1004 aa25.03■■□□□ 1.6
SMAD4-213ENST00000591914 SSU72Q9NP77 194 aaKnown RBP25.03■■□□□ 1.6
SMAD4-213ENST00000591914 BOKQ9UMX3 212 aaPredicted RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms