RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TUBB1Q9H4B7 451 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 TMBIM4Q9HC24 238 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 MAT2BQ9NZL9 334 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 SH3BP4Q9P0V3 963 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 BAIAP2L1Q9UHR4 511 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 EIF3LQ9Y262 564 aaKnown RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-227ENST00000591849 RAP2CQ9Y3L5 183 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 NPFFR2Q9Y5X5 522 aa9.31□□□□□ -0.92
BRCA1-227ENST00000591849 TRGV8A0A0C4DH27 118 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 ATP6AP2A0A1C7CYW4 349 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 ASPDHA6ND91 283 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 FAM166BA8MTA8 275 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 LSM1O15116 133 aaKnown RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 PDPK1O15530 556 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 ASNA1O43681 348 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 ATP6AP2O75787 350 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 ABOP16442 354 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 GPC1P35052 558 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 HPCAL1P37235 193 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 RPL3P39023 403 aaKnown RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 PER3P56645 1201 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 PPIAP62937 165 aaKnown RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 KCNJ2P63252 427 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 MRPS35P82673 323 aaKnown RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 MAD2L1Q13257 205 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 MPP2Q14168 576 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 KIAA0040Q15053 153 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 PDCD2Q16342 344 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 UGT3A2Q3SY77 523 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 RFTN2Q52LD8 501 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 TNFAIP8L3Q5GJ75 292 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 AGBL2Q5U5Z8 902 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF324BQ6AW86 544 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 TMEM64Q6YI46 380 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 RNF165Q6ZSG1 346 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 HDXQ7Z353 690 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF227Q86WZ6 799 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 PRR22Q8IZ63 422 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 GHDCQ8N2G8 530 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF615Q8N8J6 731 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 OR2M7Q8NG81 312 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 CLHC1Q8NHS4 586 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 C16orf52Q8NHV5 167 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 ERP27Q96DN0 273 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 C11orf24Q96F05 449 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 EGLN2Q96KS0 407 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 PPP1R36Q96LQ0 422 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 JSRP1Q96MG2 331 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 GPR137Q96N19 417 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF681Q96N22 645 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 FRMD6Q96NE9 622 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 PRPF18Q99633 342 aaKnown RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 REEP4Q9H6H4 257 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 EXO5Q9H790 373 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 DDX18Q9NVP1 670 aaKnown RBP9.3□□□□□ -0.92
BRCA1-227ENST00000591849 CNIH4Q9P003 139 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 SH3BGRL2Q9UJC5 107 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 SLC5A6Q9Y289 635 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 CCL27Q9Y4X3 112 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 HIVEP3Q5T1R4 2406 aa9.3□□□□□ -0.92
BRCA1-227ENST00000591849 ESPL1Q14674 2120 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 TEX15Q9BXT5 2789 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 A0A1B0GUH1 482 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 CLEC18AA5D8T8 446 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 NPIPB8E9PQR5 432 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ACOX3O15254 700 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 LRRTM2O43300 516 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 HS6ST1O60243 411 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 COQ9O75208 318 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 REM1O75628 298 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 PDE9AO76083 593 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 NADKO95544 446 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 CLPSP04118 112 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 FBXO45P0C2W1 286 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 DHRS4L1P0CG22 281 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 CCL3P10147 92 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ESRRAP11474 423 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 PRPS2P11908 318 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 BCKDHAP12694 445 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 GP1BBP13224 206 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 SDC1P18827 310 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 S1PR1P21453 382 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 GPX3P22352 226 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 TACR1P25103 407 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 PIGAP37287 484 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 DNASE1L1P49184 302 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 RPL14P50914 215 aaKnown RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 MANFP55145 182 aaKnown RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 DUSP2Q05923 314 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 PLCXD2Q0VAA5 305 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 MGAT2Q10469 447 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF155Q12901 538 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ZNHIT3Q15649 155 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 NNATQ16517 81 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF791Q3KP31 576 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-227ENST00000591849 ZNF628Q5EBL2 1059 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 C6orf136Q5SQH8 315 aa9.29□□□□□ -0.92
BRCA1-227ENST00000591849 PRAMEF20Q5VT98 475 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms