RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	MAPKAP1	Q9BPZ7	522 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	AIF1L	Q9BQI0	150 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	ERVK-6	Q9BXR3	956 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	HDHD5	Q9BXW7	423 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	GOLPH3	Q9H4A6	298 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	METTL7A	Q9H8H3	244 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	ACTR8	Q9H981	624 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	GALNT9	Q9HCQ5	603 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	NGB	Q9NPG2	151 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	SYBU	Q9NX95	663 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	MOCS1	Q9NZB8	636 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	FBXL2	Q9UKC9	423 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	CLEC4A	Q9UMR7	237 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	ERVK-19	Q9WJR5	959 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	EFR3B	Q9Y2G0	817 aa		5.74	□□□□□ -1.49
DNMT1-222	ENST00000590619	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	5.74	□□□□□ -1.49	5e-9	■□□□□ 8.4
DNMT1-222	ENST00000590619	MACROD2	A1Z1Q3	448 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619		B4DXG7	233 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	NDUFS8	O00217	210 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	NTN1	O95631	604 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	RHOXF2B	P0C7M4	288 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	TCEA1	P23193	301 aa	Known RBP	5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	CERS1	P27544	350 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	SRD5A2	P31213	254 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	IL2RG	P31785	369 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	SLC6A8	P48029	635 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	LIMS1	P48059	325 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	EEFSEC	P57772	596 aa	Known RBP	5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	RPP38	P78345	283 aa	Known RBP	5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	KIF5A	Q12840	1032 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	FOXL1	Q12952	345 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	RCN2	Q14257	317 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	OR5M10	Q6IEU7	315 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	MRNIP	Q6NTE8	343 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	MFSD12	Q6NUT3	480 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	CASC4	Q6P4E1	433 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	TMEM81	Q6P7N7	255 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	FIGNL1	Q6PIW4	674 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	RNF111	Q6ZNA4	994 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	RINL	Q6ZS11	566 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	NUP54	Q7Z3B4	507 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	UBE3D	Q7Z6J8	389 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	RHOT2	Q8IXI1	618 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	MUC15	Q8N387	334 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	OTUD6B	Q8N6M0	293 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	LINC01356	Q8N9X3	169 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	C7orf57	Q8NEG2	295 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	OR2L5	Q8NG80	312 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	OR6K3	Q8NGY3	331 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	CD200R1	Q8TD46	325 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	EEF1AKMT1	Q8WVE0	214 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	MFSD3	Q96ES6	412 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	TSNARE1	Q96NA8	513 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	GPR21	Q99679	349 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	OSBPL8	Q9BZF1	889 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	REXO4	Q9GZR2	422 aa	Known RBP	5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	NUP62CL	Q9H1M0	184 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	PELI2	Q9HAT8	420 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	FOLH1B	Q9HBA9	442 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	LYRM4	Q9HD34	91 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	SNX15	Q9NRS6	342 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	FBXO34	Q9NWN3	711 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	MED29	Q9NX70	200 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	ARL15	Q9NXU5	204 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	ZNF337	Q9Y3M9	751 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	ZNF175	Q9Y473	711 aa		5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619	EPPK1	P58107	5090 aa	Known RBP	5.73	□□□□□ -1.49
DNMT1-222	ENST00000590619		A0A088AWK7	358 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619		A0A1B0GTH6	734 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	OR6C76	A6NM76	312 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	ERI2	A8K979	691 aa	Known RBP	5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	BTNL10	A8MVZ5	291 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	PJA2	O43164	708 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	GCM2	O75603	506 aa	Predicted RBP	5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	C8G	P07360	202 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	HKR1	P10072	659 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	COL6A2	P12110	1019 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	NAGA	P17050	411 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	HIST1H2AD	P20671	130 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	ZNF10	P21506	573 aa	Predicted RBP	5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	ABCD3	P28288	659 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	SSTR4	P31391	388 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	NEK2	P51955	445 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	CDH11	P55287	796 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	COPS2	P61201	443 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	RPS13	P62277	151 aa	Known RBP	5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	ZBED6	P86452	979 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	TIAL1	Q01085	375 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	BIK	Q13323	160 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	SNTA1	Q13424	505 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	P2RY6	Q15077	328 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	TCEAL1	Q15170	157 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	ZSWIM7	Q19AV6	140 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	ADPRM	Q3LIE5	342 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	SFRP5	Q5T4F7	317 aa		5.72	□□□□□ -1.49
DNMT1-222	ENST00000590619	AADACL2	Q6P093	401 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms