RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SLC25A19Q9HC21 320 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 GSTK1Q9Y2Q3 226 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 STON1Q9Y6Q2 735 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 LRRC37A2A6NM11 1700 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 IRAK2O43187 625 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 FGF18O76093 207 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 HLA-DQB1P01920 261 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 RLN2P04090 185 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 AIF1P55008 147 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 RPS26P62854 115 aaKnown RBP14.38□□□□□ -0.11
CIRBP-228ENST00000590347 GINS1Q14691 196 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 IFI44LQ53G44 452 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 FIP1L1Q6UN15 594 aaKnown RBP14.38□□□□□ -0.11
CIRBP-228ENST00000590347 GDPGP1Q6ZNW5 385 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 HUS1BQ8NHY5 278 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 MRPS24Q96EL2 167 aaKnown RBP14.38□□□□□ -0.11
CIRBP-228ENST00000590347 PRR14Q9BWN1 585 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 DPAGT1Q9H3H5 408 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 LRFN2Q9ULH4 789 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 OR10H1Q9Y4A9 318 aa14.38□□□□□ -0.11
CIRBP-228ENST00000590347 CASTOR2A6NHX0 329 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 ADAM11O75078 769 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 NTN1O95631 604 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 APOC1P02654 83 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 EPB42P16452 691 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 OGNP20774 298 aaKnown RBP14.37□□□□□ -0.11
CIRBP-228ENST00000590347 OPRD1P41143 372 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 WNT3P56703 355 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 COL9A2Q14055 689 aaPredicted RBP14.37□□□□□ -0.11
CIRBP-228ENST00000590347 ARHGAP15Q53QZ3 475 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 RRM2BQ7LG56 351 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 OR4D10Q8NGI6 311 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 IGSF8Q969P0 613 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 TBX5Q99593 518 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 ARL6Q9H0F7 186 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 KLHL1Q9NR64 748 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 NUDT4Q9NZJ9 180 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 IL20RAQ9UHF4 553 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 FXYD6-FXYD2A0A087WZ82 144 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 A0A0D9SEW6 157 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 KRBOX1C9JBD0 128 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 PRR23D1E9PI22 279 aaPredicted RBP14.37□□□□□ -0.11
CIRBP-228ENST00000590347 PRAMEF12O95522 483 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 PRR23D2P0DMB1 279 aaPredicted RBP14.37□□□□□ -0.11
CIRBP-228ENST00000590347 GPX2P18283 190 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 HOXA1P49639 335 aaPredicted RBP14.37□□□□□ -0.11
CIRBP-228ENST00000590347 XKP51811 444 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 HEPACAMQ14CZ8 416 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 ZNF467Q7Z7K2 595 aaPredicted RBP14.37□□□□□ -0.11
CIRBP-228ENST00000590347 SYNPOQ8N3V7 929 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 PROKR2Q8NFJ6 384 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 ZDHHC1Q8WTX9 485 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 WFDC6Q9BQY6 131 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 ORAI3Q9BRQ5 295 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 PITHD1Q9GZP4 211 aaPredicted RBP14.37□□□□□ -0.11
CIRBP-228ENST00000590347 FXYD6Q9H0Q3 95 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 ATG10Q9H0Y0 220 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 NMUR1Q9HB89 426 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 POPDC3Q9HBV1 291 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 CD93Q9NPY3 652 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 NIT2Q9NQR4 276 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 TAS2R7Q9NYW3 318 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 CTSFQ9UBX1 484 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 TINAGQ9UJW2 476 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 SLC22A7Q9Y694 548 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 C17orf102A2RUQ5 167 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 TMEM200CA6NKL6 621 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 A8MXK9 166 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 IGHA2P01877 340 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 H2AFB2P0C5Z0 115 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 VEGFCP49767 419 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 MC2RQ01718 297 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 TNFRSF17Q02223 184 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 LGALS3BPQ08380 585 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 FGL1Q08830 312 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 RGNQ15493 299 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 SMAD2Q15796 467 aaKnown RBP14.37□□□□□ -0.11
CIRBP-228ENST00000590347 CLEC12AQ5QGZ9 265 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 NOXRED1Q6NXP6 359 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 OVCH2Q7RTZ1 564 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 DDX53Q86TM3 631 aaKnown RBP14.37□□□□□ -0.11
CIRBP-228ENST00000590347 OR4F15Q8NGB8 312 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 SOSTQ9BQB4 213 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 RC3H2Q9HBD1 1191 aaKnown RBP14.37□□□□□ -0.11
CIRBP-228ENST00000590347 MGAT4CQ9UBM8 478 aa14.37□□□□□ -0.11
CIRBP-228ENST00000590347 ABT1Q9ULW3 272 aaKnown RBP14.37□□□□□ -0.11
CIRBP-228ENST00000590347 ZNF593O00488 134 aaPredicted RBP14.36□□□□□ -0.11
CIRBP-228ENST00000590347 EIF3GO75821 320 aaKnown RBP eCLIP14.36□□□□□ -0.11
CIRBP-228ENST00000590347 LGI1O95970 557 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 CTPS1P17812 591 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 WARSP23381 471 aaKnown RBP14.36□□□□□ -0.11
CIRBP-228ENST00000590347 CTSCP53634 463 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 MAP4K2Q12851 820 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 PCBP2Q15366 365 aaKnown RBP eCLIP14.36□□□□□ -0.11
CIRBP-228ENST00000590347 GPR33Q49SQ1 333 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 AKIRIN2Q53H80 203 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 MORN1Q5T089 497 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 GCNT6Q5T4J0 391 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 C18orf63Q68DL7 685 aa14.36□□□□□ -0.11
CIRBP-228ENST00000590347 FAM151BQ6UXP7 276 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms