RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 FBXW8Q8N3Y1 598 aa16.59■□□□□ 0.25
CIRBP-227ENST00000590188 AGR3Q8TD06 166 aa16.59■□□□□ 0.25
CIRBP-227ENST00000590188 NXF5Q9H1B4 397 aaKnown RBP16.59■□□□□ 0.25
CIRBP-227ENST00000590188 IL1RL2Q9HB29 575 aa16.59■□□□□ 0.25
CIRBP-227ENST00000590188 RRAGDQ9NQL2 400 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-227ENST00000590188 GIMAP4Q9NUV9 329 aa16.59■□□□□ 0.25
CIRBP-227ENST00000590188 TNFRSF10DQ9UBN6 386 aa16.59■□□□□ 0.25
CIRBP-227ENST00000590188 MEMO1Q9Y316 297 aa16.59■□□□□ 0.25
CIRBP-227ENST00000590188 NPFFR2Q9Y5X5 522 aa16.59■□□□□ 0.25
CIRBP-227ENST00000590188 CHCHD2Q9Y6H1 151 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-227ENST00000590188 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.59■□□□□ 0.25
CIRBP-227ENST00000590188 SPTBN1Q01082 2364 aaKnown RBP16.59■□□□□ 0.25
CIRBP-227ENST00000590188 TMEM233B4DJY2 109 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 PRSS44E7EML9 344 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 H3BQF6 201 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 RSL1D1O76021 490 aaKnown RBP16.58■□□□□ 0.24
CIRBP-227ENST00000590188 GLSO94925 669 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-227ENST00000590188 NRG3P56975 720 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 FOXO1Q12778 655 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 NTRK2Q16620 822 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 DESI1Q6ICB0 168 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 GALNT18Q6P9A2 607 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 BNC2Q6ZN30 1099 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-227ENST00000590188 TRIM46Q7Z4K8 759 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 TICAM1Q8IUC6 712 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 FAM57AQ8TBR7 257 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 DIO2Q92813 273 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 TP53INP1Q96A56 240 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 C11orf24Q96F05 449 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-227ENST00000590188 PROK2Q9HC23 129 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 EHD3Q9NZN3 535 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 ZNF639Q9UID6 485 aa16.58■□□□□ 0.24
CIRBP-227ENST00000590188 CNOT11Q9UKZ1 510 aaKnown RBP16.58■□□□□ 0.24
CIRBP-227ENST00000590188 NPIPA2E9PIF3 369 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 NPIPA3F8WFD2 350 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 SEC22BO75396 215 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 RFPL3SP0C7P2 107 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 LINC00032P0C843 101 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 DCTP40126 519 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 RPS6KA2Q15349 733 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 ZNF628Q5EBL2 1059 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 NOXRED1Q6NXP6 359 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 MTFR2Q6P444 385 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 FAM109AQ8N4B1 249 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 MREGQ8N565 214 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 OR2T11Q8NH01 316 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 GFM2Q969S9 779 aaKnown RBP16.57■□□□□ 0.24
CIRBP-227ENST00000590188 BBS4Q96RK4 519 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 DOHHQ9BU89 302 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 EXO5Q9H790 373 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 ZDHHC11Q9H8X9 412 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 MIEF1Q9NQG6 463 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 SLC35C2Q9NQQ7 365 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 SENP1Q9P0U3 644 aa16.57■□□□□ 0.24
CIRBP-227ENST00000590188 DOPEY1Q5JWR5 2465 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 CAPN14A8MX76 684 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 SLC28A1O00337 649 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 TP53I11O14683 189 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 DDCP20711 480 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 ABCD3P28288 659 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 GRNP28799 593 aaKnown RBP16.56■□□□□ 0.24
CIRBP-227ENST00000590188 ZNF844Q08AG5 666 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 ARL13AQ5H913 290 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-227ENST00000590188 KANK2Q63ZY3 851 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 FAM71E1Q6IPT2 247 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 ARHGAP11AQ6P4F7 1023 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 PAOXQ6QHF9 649 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 RGS9BPQ6ZS82 235 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 DDIASQ8IXT1 998 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 DND1Q8IYX4 353 aaKnown RBP16.56■□□□□ 0.24
CIRBP-227ENST00000590188 FAM9CQ8IZT9 166 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 ZNF808Q8N4W9 903 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-227ENST00000590188 OR5M9Q8NGP3 310 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 SPPL2AQ8TCT8 520 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 CTHRC1Q96CG8 243 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 EGLN2Q96KS0 407 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 CENPHQ9H3R5 247 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 TUBB1Q9H4B7 451 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 LDAHQ9H6V9 325 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 LRTM1Q9HBL6 345 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 PLSCR2Q9NRY7 297 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 SIRT5Q9NXA8 310 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 CNIH4Q9P003 139 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 BOKQ9UMX3 212 aaPredicted RBP16.56■□□□□ 0.24
CIRBP-227ENST00000590188 CFL2Q9Y281 166 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 CCL27Q9Y4X3 112 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 HRH3Q9Y5N1 445 aa16.56■□□□□ 0.24
CIRBP-227ENST00000590188 LRRC3CA6NJW4 275 aa16.55■□□□□ 0.24
CIRBP-227ENST00000590188 ADAM10O14672 748 aa16.55■□□□□ 0.24
CIRBP-227ENST00000590188 RGS16O15492 202 aaPredicted RBP16.55■□□□□ 0.24
CIRBP-227ENST00000590188 RGS14O43566 566 aa16.55■□□□□ 0.24
CIRBP-227ENST00000590188 NPHS1O60500 1241 aa16.55■□□□□ 0.24
CIRBP-227ENST00000590188 CHEK2O96017 543 aa16.55■□□□□ 0.24
CIRBP-227ENST00000590188 JUNP05412 331 aaKnown RBP16.55■□□□□ 0.24
CIRBP-227ENST00000590188 TACR1P25103 407 aa16.55■□□□□ 0.24
CIRBP-227ENST00000590188 TMED10P49755 219 aaKnown RBP16.55■□□□□ 0.24
CIRBP-227ENST00000590188 EMDP50402 254 aa16.55■□□□□ 0.24
CIRBP-227ENST00000590188 NCBP2P52298 156 aaKnown RBP eCLIP16.55■□□□□ 0.24
CIRBP-227ENST00000590188 RPL38P63173 70 aaKnown RBP16.55■□□□□ 0.24
CIRBP-227ENST00000590188 PLCXD2Q0VAA5 305 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms