RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 LINC01560Q8TB33 94 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 TRPC4APQ8TEL6 797 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 DOK4Q8TEW6 326 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 SMPDL3BQ92485 455 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 C18orf12Q96KH6 178 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 NAPGQ99747 312 aaPredicted RBP12.77□□□□□ -0.37
VMP1-209ENST00000588915 TM9SF2Q99805 663 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 SFXN3Q9BWM7 321 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 IPPKQ9H8X2 491 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 BEX4Q9NWD9 120 aaPredicted RBP12.77□□□□□ -0.37
VMP1-209ENST00000588915 AHSPQ9NZD4 102 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 ADAM29Q9UKF5 820 aa12.77□□□□□ -0.37
VMP1-209ENST00000588915 CLCA1A8K7I4 914 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 FAM171A2A8MVW0 826 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 PGRMC2O15173 223 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 PPM1BO75688 479 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 CBR3O75828 277 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 CLDN9O95484 217 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 CYP4B1P13584 511 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 GFAPP14136 432 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 PORP16435 677 aaPredicted RBP12.76□□□□□ -0.37
VMP1-209ENST00000588915 S1PR1P21453 382 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 CHMP24386 653 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 STX2P32856 288 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 PCYT1AP49585 367 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 NAGLUP54802 743 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 WNT3P56703 355 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 GNG11P61952 73 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 MAP4K2Q12851 820 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 GTF2H2Q13888 395 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 SLMAPQ14BN4 828 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 TOMM20Q15388 145 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 EIPR1Q53HC9 387 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 SHEQ5VZ18 495 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 GTF2H2CQ6P1K8 395 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 PAGE2Q7Z2X7 111 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 CENPLQ8N0S6 344 aaPredicted RBP12.76□□□□□ -0.37
VMP1-209ENST00000588915 FAM83FQ8NEG4 500 aaPredicted RBP12.76□□□□□ -0.37
VMP1-209ENST00000588915 DTNBP1Q96EV8 351 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 YIPF4Q9BSR8 244 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 ACBD3Q9H3P7 528 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 RNF11Q9Y3C5 154 aa12.76□□□□□ -0.37
VMP1-209ENST00000588915 EEF1E1-BLOC1S5C9J1V9 151 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 ACOX3O15254 700 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 EEF1E1O43324 174 aaKnown RBP12.75□□□□□ -0.37
VMP1-209ENST00000588915 GUCY1B2O75343 617 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 ERN1O75460 977 aaKnown RBP12.75□□□□□ -0.37
VMP1-209ENST00000588915 RCBTB2O95199 551 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 HRGP04196 525 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 C2P06681 752 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 CT62P0C5K7 136 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 TMIGD3P0DMS9 266 aaPredicted RBP12.75□□□□□ -0.37
VMP1-209ENST00000588915 CPMP14384 443 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 GPX3P22352 226 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 GMPRP36959 345 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 DCAF7P61962 342 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 LTBQ06643 244 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 GAB1Q13480 694 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 WIPI1Q5MNZ9 446 aaPredicted RBP12.75□□□□□ -0.37
VMP1-209ENST00000588915 ENPP6Q6UWR7 440 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 ADGRE4PQ86SQ3 457 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 WFDC11Q8NEX6 87 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 KCTD4Q8WVF5 259 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 WNT2BQ93097 391 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 UCN3Q969E3 161 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 DOCK7Q96N67 2140 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 NTMT1Q9BV86 223 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 RBM24Q9BX46 236 aaKnown RBP12.75□□□□□ -0.37
VMP1-209ENST00000588915 NXF5Q9H1B4 397 aaKnown RBP12.75□□□□□ -0.37
VMP1-209ENST00000588915 DPH5Q9H2P9 285 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 PIGMQ9H3S5 423 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 METTL7AQ9H8H3 244 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 GRHL1Q9NZI5 618 aa12.75□□□□□ -0.37
VMP1-209ENST00000588915 EXO1Q9UQ84 846 aaKnown RBP12.75□□□□□ -0.37
VMP1-209ENST00000588915 C1orf226A1L170 272 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 GNB5O14775 395 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 SNPHO15079 494 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 ARHGEF9O43307 516 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 ICOSLGO75144 302 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 KLHL2O95198 593 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 INHBBP09529 407 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 CD53P19397 219 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 NT5EP21589 574 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 MAGEA4P43358 317 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 NEK2P51955 445 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 PRICKLE4Q2TBC4 344 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 DCST1Q5T197 706 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 FRG2Q64ET8 278 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 KLC3Q6P597 504 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 ANGPTL8Q6UXH0 198 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 GOLGA7Q7Z5G4 137 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 C9orf106Q8NAJ2 232 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 FBF1Q8TES7 1133 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 HGDQ93099 445 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 LCORQ96JN0 433 aaPredicted RBP12.74□□□□□ -0.37
VMP1-209ENST00000588915 FRG2BQ96QU4 278 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 OSBPL11Q9BXB4 747 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 OR2B2Q9GZK3 357 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 NDRG3Q9UGV2 375 aa12.74□□□□□ -0.37
VMP1-209ENST00000588915 ZNF639Q9UID6 485 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms