RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 FRG2Q64ET8 278 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 DESI1Q6ICB0 168 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 FAM180BQ6P0A1 224 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 FAM111BQ6SJ93 734 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 RPS27LQ71UM5 84 aaKnown RBP12.53□□□□□ -0.4
HDAC5-208ENST00000588419 PAGE2Q7Z2X7 111 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 CCDC91Q7Z6B0 441 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 MMP21Q8N119 569 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 VWA5B2Q8N398 1253 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 C17orf53Q8N3J3 647 aaPredicted RBP12.53□□□□□ -0.4
HDAC5-208ENST00000588419 ZNF615Q8N8J6 731 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 OR1J4Q8NGS1 313 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 LINC01560Q8TB33 94 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 ABTB1Q969K4 478 aaPredicted RBP12.53□□□□□ -0.4
HDAC5-208ENST00000588419 ADIPOR1Q96A54 375 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 TP53INP1Q96A56 240 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 FRG2BQ96QU4 278 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 TMUB1Q9BVT8 246 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 OSBPL11Q9BXB4 747 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 ANGPTL4Q9BY76 406 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 NXF5Q9H1B4 397 aaKnown RBP12.53□□□□□ -0.4
HDAC5-208ENST00000588419 ELOVL6Q9H5J4 265 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 GALNT9Q9HCQ5 603 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 XPR1Q9UBH6 696 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 PCDHGB3Q9Y5G1 929 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 ZFHX3Q15911 3703 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 ABCA4P78363 2273 aa12.53□□□□□ -0.4
HDAC5-208ENST00000588419 ANKHD1Q8IWZ3 2542 aaKnown RBP12.52□□□□□ -0.4
HDAC5-208ENST00000588419 HMX2A2RU54 273 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 ANKRD33BA6NCL7 494 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 TUBAL3A6NHL2 446 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 GOLGA6L10A6NI86 522 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 H0Y3Z8 333 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 SYT5O00445 386 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 SMIM24O75264 130 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 SEMA3DO95025 777 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 ALDOAP04075 364 aaKnown RBP12.52□□□□□ -0.41
HDAC5-208ENST00000588419 HPNP05981 417 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 PORP16435 677 aaPredicted RBP12.52□□□□□ -0.41
HDAC5-208ENST00000588419 TSPAN8P19075 237 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 CEACAM8P31997 349 aaPredicted RBP12.52□□□□□ -0.41
HDAC5-208ENST00000588419 GCKP35557 465 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 TIMP3P35625 211 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 FUT7Q11130 342 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 FOXD4Q12950 439 aaPredicted RBP12.52□□□□□ -0.41
HDAC5-208ENST00000588419 POU4F3Q15319 338 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 FNDC7Q5VTL7 733 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 C8orf74Q6P047 294 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 PLXDC2Q6UX71 529 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 SYT10Q6XYQ8 523 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 FAM83FQ8NEG4 500 aaPredicted RBP12.52□□□□□ -0.41
HDAC5-208ENST00000588419 ADCY4Q8NFM4 1077 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 OR4F6Q8NGB9 312 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 OR14L1PQ8NHC6 308 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 FAM222BQ8WU58 562 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 KLHL29Q96CT2 875 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 OMA1Q96E52 524 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 TMEM41AQ96HV5 264 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 HBEGFQ99075 208 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 YIPF4Q9BSR8 244 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 PRDM14Q9GZV8 571 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 UBQLN3Q9H347 655 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 AHSPQ9NZD4 102 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 PCTPQ9UKL6 214 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 EDARQ9UNE0 448 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 ITPR3Q14573 2671 aa12.52□□□□□ -0.41
HDAC5-208ENST00000588419 PPM1BO75688 479 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 ESRRBO95718 433 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 INHBAP08476 426 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 TMIGD3P0DMS9 266 aaPredicted RBP12.51□□□□□ -0.41
HDAC5-208ENST00000588419 CYP4B1P13584 511 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 PTPN6P29350 595 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 CPA2P48052 419 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 TRAF3Q13114 568 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 KEAP1Q14145 624 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 SF3B4Q15427 424 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■■■□ 21.8
HDAC5-208ENST00000588419 LTB4RQ15722 352 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 NSUN5P2Q63ZY6 315 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 VASNQ6EMK4 673 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 PAMR1Q6UXH9 720 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 COMMD6Q7Z4G1 85 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 MILR1Q7Z6M3 343 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 LUZP2Q86TE4 346 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 C9orf106Q8NAJ2 232 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 OR7G1Q8NGA0 311 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 OR52R1Q8NGF1 315 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 SELENOMQ8WWX9 145 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 POM121Q96HA1 1249 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 WDYHV1Q96HA8 205 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 GPR78Q96P69 363 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 NODALQ96S42 347 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 SECISBP2Q96T21 854 aaKnown RBP12.51□□□□□ -0.41
HDAC5-208ENST00000588419 CXXC4Q9H2H0 198 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 SERHLQ9NQF3 203 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 FARSBQ9NSD9 589 aaKnown RBP12.51□□□□□ -0.41
HDAC5-208ENST00000588419 NINJ2Q9NZG7 142 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
HDAC5-208ENST00000588419 FOXD3Q9UJU5 478 aaPredicted RBP12.51□□□□□ -0.41
HDAC5-208ENST00000588419 PLLPQ9Y342 182 aa12.51□□□□□ -0.41
HDAC5-208ENST00000588419 IKBKGQ9Y6K9 419 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 230.9 ms