RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 ZNF483Q8TF39 744 aaPredicted RBP12.89□□□□□ -0.35
HDAC5-203ENST00000586339 UCN3Q969E3 161 aa12.89□□□□□ -0.35
HDAC5-203ENST00000586339 TMEM41AQ96HV5 264 aa12.89□□□□□ -0.35
HDAC5-203ENST00000586339 RILPQ96NA2 401 aa12.89□□□□□ -0.35
HDAC5-203ENST00000586339 NMRK1Q9NWW6 199 aa12.89□□□□□ -0.35
HDAC5-203ENST00000586339 ALKBH4Q9NXW9 302 aa12.89□□□□□ -0.35
HDAC5-203ENST00000586339 NFU1Q9UMS0 254 aa12.89□□□□□ -0.35
HDAC5-203ENST00000586339 SNX6Q9UNH7 406 aa12.89□□□□□ -0.35
HDAC5-203ENST00000586339 PCDHA9Q9Y5H5 950 aa12.89□□□□□ -0.35
HDAC5-203ENST00000586339 KIAA1549Q9HCM3 1950 aa12.89□□□□□ -0.35
HDAC5-203ENST00000586339 C15orf38-AP3S2A0A0A6YYH1 394 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 ZWINTO95229 277 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 LRATO95237 230 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 HPNP05981 417 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 HSD3B1P14060 373 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 KRT15P19012 456 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 S1PR1P21453 382 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 GPX3P22352 226 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 HSD3B2P26439 372 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 ABCD3P28288 659 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 TIMP3P35625 211 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 MASP1P48740 699 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 TRPC1P48995 793 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 TRA2BP62995 288 aaKnown RBP12.88□□□□□ -0.35
HDAC5-203ENST00000586339 GALNT1Q10472 559 aaPredicted RBP12.88□□□□□ -0.35
HDAC5-203ENST00000586339 MAP4K2Q12851 820 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 PRICKLE4Q2TBC4 344 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 NHSL2Q5HYW2 709 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 LETMD1Q6P1Q0 360 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 DCAKDQ8WVC6 231 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 SELENOMQ8WWX9 145 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 NTNG2Q96CW9 530 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 TRIM44Q96DX7 344 aaPredicted RBP12.88□□□□□ -0.35
HDAC5-203ENST00000586339 HSPBAP1Q96EW2 488 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 LRRC46Q96FV0 321 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 FAIM2Q9BWQ8 316 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 PRDM14Q9GZV8 571 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 TRPS1Q9UHF7 1281 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 CES1P1Q9UKY3 287 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 PSME2Q9UL46 239 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 SLC12A4Q9UP95 1085 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 C15orf41Q9Y2V0 281 aa12.88□□□□□ -0.35
HDAC5-203ENST00000586339 A0A087WUV0 522 aaPredicted RBP12.87□□□□□ -0.35
HDAC5-203ENST00000586339 A8MT66 165 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 TRIM49D1C9J1S8 452 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 POC1B-GALNT4F8VUJ3 575 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 DVL2O14641 736 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 ACOX3O15254 700 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 PPM1BO75688 479 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 EPPINO95925 133 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 RHOXF2BP0C7M4 288 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 CSNK2A2P19784 350 aaPredicted RBP12.87□□□□□ -0.35
HDAC5-203ENST00000586339 CEACAM8P31997 349 aaPredicted RBP12.87□□□□□ -0.35
HDAC5-203ENST00000586339 DEKP35659 375 aaKnown RBP12.87□□□□□ -0.35
HDAC5-203ENST00000586339 CASP3P42574 277 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 ASCL1P50553 236 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 DLX5P56178 289 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 DCAF7P61962 342 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 SNTA1Q13424 505 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 FBXL19-AS1Q494R0 122 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 FNDC7Q5VTL7 733 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 BICRALQ6AI39 1079 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 ARSKQ6UWY0 536 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 TMEM64Q6YI46 380 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 SEM1Q6ZVN7 128 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 LCA5Q86VQ0 697 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 CNPY4Q8N129 248 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 RHOXF2Q9BQY4 288 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 NXF5Q9H1B4 397 aaKnown RBP12.87□□□□□ -0.35
HDAC5-203ENST00000586339 MAT2BQ9NZL9 334 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 ZNF629Q9UEG4 869 aaPredicted RBP12.87□□□□□ -0.35
HDAC5-203ENST00000586339 FETUBQ9UGM5 382 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 ZNF639Q9UID6 485 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 FOXD3Q9UJU5 478 aaPredicted RBP12.87□□□□□ -0.35
HDAC5-203ENST00000586339 ACANP16112 2415 aa12.87□□□□□ -0.35
HDAC5-203ENST00000586339 SYT5O00445 386 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 TRAPPC6AO75865 159 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 PDYNP01213 254 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 ABCB1P08183 1280 aaPredicted RBP12.86□□□□□ -0.35
HDAC5-203ENST00000586339 SNRPAP09012 282 aaKnown RBP12.86□□□□□ -0.35
HDAC5-203ENST00000586339 FAM153BP0C7A2 387 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 GCAP28676 217 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 CSTF3Q12996 717 aaKnown RBP12.86□□□□□ -0.35
HDAC5-203ENST00000586339 RASA2Q15283 850 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 FAM153CQ494X1 144 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 SGO1Q5FBB7 561 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 LGSNQ5TDP6 509 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 NSUN5P2Q63ZY6 315 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 TIGD3Q6B0B8 471 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 VASNQ6EMK4 673 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 SLC30A6Q6NXT4 461 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 NUP54Q7Z3B4 507 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 GSPT2Q8IYD1 628 aaKnown RBP12.86□□□□□ -0.35
HDAC5-203ENST00000586339 TMEM151AQ8N4L1 468 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 RELL2Q8NC24 303 aaPredicted RBP12.86□□□□□ -0.35
HDAC5-203ENST00000586339 NINJ1Q92982 152 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 CTHRC1Q96CG8 243 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 ERP27Q96DN0 273 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 MTBPQ96DY7 904 aa12.86□□□□□ -0.35
HDAC5-203ENST00000586339 LCORQ96JN0 433 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms