RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 PRODH2Q9UF12 536 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 VPS4AQ9UN37 437 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 C19orf53Q9UNZ5 99 aaPredicted RBP12.67□□□□□ -0.38
VMP1-203ENST00000586245 NDUFAF1Q9Y375 327 aa12.67□□□□□ -0.38
VMP1-203ENST00000586245 PCSK5Q92824 1860 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 RNF103-CHMP3A0A140T963 221 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 LOC100653049A0A140TA62 436 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 A6NL46 340 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 BBIP1A8MTZ0 92 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 UPK1AO00322 258 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 KRT34O76011 436 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 CELA2AP08217 269 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 ITGAMP11215 1152 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 UQCRC2P22695 453 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 SOX18P35713 384 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 CCT3P49368 545 aaKnown RBP12.66□□□□□ -0.38
VMP1-203ENST00000586245 CCL11P51671 97 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 RNF4P78317 190 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 STX5Q13190 355 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 FHL5Q5TD97 284 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 HLA-DQA1Q5Y7H0 255 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 BORAQ6PGQ7 559 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 BHLHB9Q6PI77 547 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 ZNF621Q6ZSS3 439 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 SNX32Q86XE0 403 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 GALNT16Q8N428 558 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 KIF2BQ8N4N8 673 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 SLC5A8Q8N695 610 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 ZNF615Q8N8J6 731 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 OR56A1Q8NGH5 318 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 OR8K3Q8NH51 312 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 OR5AK3PQ8NH89 298 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 DNAJB8Q8NHS0 232 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 GOT1L1Q8NHS2 421 aaPredicted RBP12.66□□□□□ -0.38
VMP1-203ENST00000586245 GTF2H4Q92759 462 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 CMTM5Q96DZ9 223 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 FAM120BQ96EK7 910 aaKnown RBP12.66□□□□□ -0.38
VMP1-203ENST00000586245 INPP5KQ9BT40 448 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 ANKRA2Q9H9E1 313 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 SLC52A3Q9NQ40 469 aa12.66□□□□□ -0.38
VMP1-203ENST00000586245 ASPDHA6ND91 283 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 A8MUI8 341 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 KCNH1O95259 989 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 CLPSP04118 112 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 GSNP06396 782 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 ZCCHC18P0CG32 403 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 COX4I1P13073 169 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 CD1EP15812 388 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 PRDX6P30041 224 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 CHI3L1P36222 383 aaPredicted RBP12.65□□□□□ -0.38
VMP1-203ENST00000586245 SOX8P57073 446 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 ZNF155Q12901 538 aaPredicted RBP12.65□□□□□ -0.38
VMP1-203ENST00000586245 TP53BP2Q13625 1128 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 MYBPC3Q14896 1274 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 EBPQ15125 230 aaKnown RBP12.65□□□□□ -0.38
VMP1-203ENST00000586245 TLR1Q15399 786 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 ZNHIT3Q15649 155 aaPredicted RBP12.65□□□□□ -0.38
VMP1-203ENST00000586245 ST3GAL2Q16842 350 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 PAGE3Q5JUK9 113 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 DNAJC14Q6Y2X3 702 aaPredicted RBP12.65□□□□□ -0.38
VMP1-203ENST00000586245 C9orf40Q8IXQ3 194 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 AMER2Q8N7J2 671 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 SIMC1Q8NDZ2 872 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 C16orf52Q8NHV5 167 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 BRIX1Q8TDN6 353 aaKnown RBP12.65□□□□□ -0.38
VMP1-203ENST00000586245 MS4A4EQ96PG1 132 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 GAL3ST4Q96RP7 486 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 SLC35A5Q9BS91 424 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 WWTR1Q9GZV5 400 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 EQTNQ9NQ60 294 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 SERHLQ9NQF3 203 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 NTMQ9P121 344 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 TEKT2Q9UIF3 430 aa12.65□□□□□ -0.38
VMP1-203ENST00000586245 ZNF223Q9UK11 482 aaPredicted RBP12.65□□□□□ -0.38
VMP1-203ENST00000586245 HEMK1Q9Y5R4 338 aaPredicted RBP12.65□□□□□ -0.38
VMP1-203ENST00000586245 DMXL2Q8TDJ6 3036 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 A0A096LPI6 279 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 C2orf92A0A1B0GVN3 265 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 MRASO14807 208 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 ERN1O75460 977 aaKnown RBP12.64□□□□□ -0.39
VMP1-203ENST00000586245 DNAJB5O75953 348 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 CDKN2CP42773 168 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 PRIM2P49643 509 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 EMDP50402 254 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 DCAF7P61962 342 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 DUSP8Q13202 625 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 NFYCQ13952 458 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 TBR1Q16650 682 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 COQ5Q5HYK3 327 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 FAM91A1Q658Y4 838 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 REP15Q6BDI9 236 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 GPR155Q7Z3F1 870 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 DHDDSQ86SQ9 333 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 TREML1Q86YW5 311 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 SIRT6Q8N6T7 355 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 POU5F2Q8N7G0 328 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 PCYOX1LQ8NBM8 494 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 NUBPLQ8TB37 319 aa12.64□□□□□ -0.39
VMP1-203ENST00000586245 THAP3Q8WTV1 239 aaPredicted RBP12.64□□□□□ -0.39
VMP1-203ENST00000586245 ZNF354BQ96LW1 612 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms