RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 FOXO1Q12778 655 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 TRMT12Q53H54 448 aaKnown RBP18.8■□□□□ 0.6
SS18-224ENST00000584083 C3P1Q6ZMU1 363 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 PRR22Q8IZ63 422 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 FAM109AQ8N4B1 249 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 MREGQ8N565 214 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 TMEM251Q8N6I4 163 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 OR52R1Q8NGF1 315 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 FAM57AQ8TBR7 257 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 TCP10LQ8TDR4 215 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 BBS4Q96RK4 519 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 ZDHHC11Q9H8X9 412 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 SLC35C2Q9NQQ7 365 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 ZNF639Q9UID6 485 aa18.8■□□□□ 0.6
SS18-224ENST00000584083 BOKQ9UMX3 212 aaPredicted RBP18.8■□□□□ 0.6
SS18-224ENST00000584083 POLR3HQ9Y535 204 aaPredicted RBP18.8■□□□□ 0.6
SS18-224ENST00000584083 CHCHD2Q9Y6H1 151 aaPredicted RBP18.8■□□□□ 0.6
SS18-224ENST00000584083 ATP6AP2A0A1C7CYW4 349 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 SLC28A1O00337 649 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 SEC22BO75396 215 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 ATP6AP2O75787 350 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 PCSK2P16519 638 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 SMSP52788 366 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 FBXW4P57775 412 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 MRPS35P82673 323 aaKnown RBP18.79■□□□□ 0.6
SS18-224ENST00000584083 RPS6KA2Q15349 733 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 NNATQ16517 81 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 KRT71Q3SY84 523 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 CD163Q86VB7 1156 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 EID3Q8N140 333 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 ZNF808Q8N4W9 903 aaPredicted RBP18.79■□□□□ 0.6
SS18-224ENST00000584083 SIMC1Q8NDZ2 872 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 C17orf47Q8NEP4 570 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 FAM76AQ8TAV0 307 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 DIO2Q92813 273 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 CTHRC1Q96CG8 243 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 JSRP1Q96MG2 331 aaPredicted RBP18.79■□□□□ 0.6
SS18-224ENST00000584083 PHF12Q96QT6 1004 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 MECRQ9BV79 373 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 TMEM109Q9BVC6 243 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 ITPAQ9BY32 194 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 NXF5Q9H1B4 397 aaKnown RBP18.79■□□□□ 0.6
SS18-224ENST00000584083 MIEF1Q9NQG6 463 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 PLSCR2Q9NRY7 297 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 EHD3Q9NZN3 535 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 PRODH2Q9UF12 536 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 CNOT11Q9UKZ1 510 aaKnown RBP18.79■□□□□ 0.6
SS18-224ENST00000584083 DTX4Q9Y2E6 619 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 FREM3P0C091 2139 aa18.79■□□□□ 0.6
SS18-224ENST00000584083 NCKAP5O14513 1909 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 NAV2Q8IVL1 2488 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 RGS14O43566 566 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 CBX7O95931 251 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 CHEK2O96017 543 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 MPIP34949 423 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 ADORA2A-AS1P86434 159 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 DUSP8Q13202 625 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 SLC10A1Q14973 349 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 HYAL4Q2M3T9 481 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 ZNF787Q6DD87 383 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 NOXRED1Q6NXP6 359 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 XKRXQ6PP77 449 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 OR9A2Q8NGT5 310 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 KAT2AQ92830 837 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 DOHHQ9BU89 302 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 LDAHQ9H6V9 325 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 PROK2Q9HC23 129 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 ZFP64Q9NPA5 681 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 MYNNQ9NPC7 610 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 SENP1Q9P0U3 644 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 PTGDR2Q9Y5Y4 395 aa18.78■□□□□ 0.6
SS18-224ENST00000584083 NCOA6Q14686 2063 aaPredicted RBP18.78■□□□□ 0.6
SS18-224ENST00000584083 PRSS44E7EML9 344 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 E9PLN8 166 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 NPHS1O60500 1241 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 BCAS2O75934 225 aaPredicted RBP18.77■□□□□ 0.6
SS18-224ENST00000584083 CHRNGP07510 517 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 CREB1P16220 341 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 DDCP20711 480 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 ABCD3P28288 659 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 DCTP40126 519 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 RPP38P78345 283 aaKnown RBP18.77■□□□□ 0.6
SS18-224ENST00000584083 ART3Q13508 389 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 ZNF628Q5EBL2 1059 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 TBCELQ5QJ74 424 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 FAM71E1Q6IPT2 247 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 NCCRP1Q6ZVX7 275 aaPredicted RBP18.77■□□□□ 0.6
SS18-224ENST00000584083 TICAM1Q8IUC6 712 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 FAM9CQ8IZT9 166 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 ZNF675Q8TD23 568 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 LCORQ96JN0 433 aaPredicted RBP18.77■□□□□ 0.6
SS18-224ENST00000584083 VKORC1Q9BQB6 163 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 EXO5Q9H790 373 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 ANKRA2Q9H9E1 313 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 LRTM1Q9HBL6 345 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 EML4Q9HC35 981 aaKnown RBP18.77■□□□□ 0.6
SS18-224ENST00000584083 C1orf109Q9NX04 203 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 WBP11Q9Y2W2 641 aaKnown RBP18.77■□□□□ 0.6
SS18-224ENST00000584083 CCL27Q9Y4X3 112 aa18.77■□□□□ 0.6
SS18-224ENST00000584083 LIPGQ9Y5X9 500 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms