RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 DDCP20711 480 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 NT5EP21589 574 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 GPX3P22352 226 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 PTGER1P34995 402 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 PTGS2P35354 604 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 PPIAP62937 165 aaKnown RBP9.11□□□□□ -0.95
SKA2-208ENST00000583927 HMGCS1Q01581 520 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 IFFO1Q0D2I5 559 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 KIAA0040Q15053 153 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 RPS6KA2Q15349 733 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 ZNF628Q5EBL2 1059 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 HLA-DQA1Q5Y7H0 255 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 FAM71E1Q6IPT2 247 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 FAM47EQ6ZV65 393 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 IKBIPQ70UQ0 350 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 DOLPP1Q86YN1 238 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 C10orf107Q8IVU9 208 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 MMP21Q8N119 569 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 FAM109AQ8N4B1 249 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 CCDC63Q8NA47 563 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 OR52N2Q8NGI0 321 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 OR2W6PQ8NHA6 318 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 FAM57AQ8TBR7 257 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 FCRL1Q96LA6 429 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 GAL3ST4Q96RP7 486 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 DMRTA2Q96SC8 542 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 GATA5Q9BWX5 397 aaPredicted RBP9.11□□□□□ -0.95
SKA2-208ENST00000583927 IQCGQ9H095 443 aaKnown RBP9.11□□□□□ -0.95
SKA2-208ENST00000583927 STMN4Q9H169 189 aaPredicted RBP9.11□□□□□ -0.95
SKA2-208ENST00000583927 ZFP64Q9NPA5 681 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 MYNNQ9NPC7 610 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 SLC35C2Q9NQQ7 365 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 PRODH2Q9UF12 536 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 TINAGQ9UJW2 476 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 UTS2RQ9UKP6 389 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 CNOT11Q9UKZ1 510 aaKnown RBP9.11□□□□□ -0.95
SKA2-208ENST00000583927 MEMO1Q9Y316 297 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 PCDHGB3Q9Y5G1 929 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 CSMD1Q96PZ7 3565 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 A0A087WV62 115 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 A0A0G2JMM0 328 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 A0A1B0GTH9 108 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 A0A1W2PPB8 328 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 A0A1W2PRS3 328 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 A1L4Q6 167 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 KIR3DP1A8MWS1 328 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 ESPNB1AK53 854 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 SLC28A1O00337 649 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 ADAM10O14672 748 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 AZIN1O14977 448 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 TYROBPO43914 113 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 HCN1O60741 890 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 TBX19O60806 448 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 TRIM3O75382 744 aaPredicted RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 SNX4O95219 450 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 NEFHP12036 1026 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 DRD5P21918 477 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 ABCD3P28288 659 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 MPIP34949 423 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 FEN1P39748 380 aaKnown RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 PPICP45877 212 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 ALDH9A1P49189 494 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 EMDP50402 254 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 NR0B1P51843 470 aaKnown RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 SMSP52788 366 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 RPP38P78345 283 aaKnown RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 ADORA2A-AS1P86434 159 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 PLGLB1Q02325 96 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 DUSP2Q05923 314 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 SNTA1Q13424 505 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 IMPG1Q17R60 797 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 NOXRED1Q6NXP6 359 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 SRRM1Q8IYB3 904 aaKnown RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 TMEM251Q8N6I4 163 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 OR10G3Q8NGC4 313 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 OR6Y1Q8NGX8 325 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 LCORQ96JN0 433 aaPredicted RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 BTBD9Q96Q07 612 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 PHF12Q96QT6 1004 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 SMC6Q96SB8 1091 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 ANGPTL4Q9BY76 406 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 PARD6BQ9BYG5 372 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 BRINP2Q9C0B6 783 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 TP63Q9H3D4 680 aaPredicted RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 C12orf65Q9H3J6 166 aaKnown RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 SSU72Q9NP77 194 aaKnown RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 TNFRSF12AQ9NP84 129 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 ACKR4Q9NPB9 350 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 GIMAP4Q9NUV9 329 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 TUBA8Q9NY65 449 aaPredicted RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 BOKQ9UMX3 212 aaPredicted RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 ENTPD4Q9Y227 616 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 TMED5Q9Y3A6 229 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.1□□□□□ -0.95
SKA2-208ENST00000583927 MED12Q93074 2177 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 MED12LQ86YW9 2145 aa9.1□□□□□ -0.95
SKA2-208ENST00000583927 FRG2CA6NGY1 282 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 MYO1GB0I1T2 1018 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 PLOD2O00469 737 aa9.09□□□□□ -0.95
SKA2-208ENST00000583927 AQP7O14520 342 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms