RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ZIK1Q3SY52 487 aaPredicted RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 GARNL3Q5VVW2 1013 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SHQ1Q6PI26 577 aaKnown RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 GPR155Q7Z3F1 870 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 PIWIL3Q7Z3Z3 882 aaKnown RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 VTCN1Q7Z7D3 282 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 GALNT10Q86SR1 603 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 CARFQ8N187 725 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 FAM181AQ8N9Y4 354 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 ATG16L2Q8NAA4 619 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 OR9A2Q8NGT5 310 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 PSMA8Q8TAA3 256 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 BBS10Q8TAM1 723 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SLC38A5Q8WUX1 472 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 KAT2AQ92830 837 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 GATA6Q92908 595 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 UCN3Q969E3 161 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 NRBF2Q96F24 287 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 CNRIP1Q96F85 164 aaPredicted RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 RBM18Q96H35 190 aaKnown RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 YIPF4Q9BSR8 244 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 TMEM121BQ9BXQ6 578 aaPredicted RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 ACTRT3Q9BYD9 372 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SLC7A5P2Q9GIP4 190 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 CLK4Q9HAZ1 481 aaKnown RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 SLAMF7Q9NQ25 335 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 EQTNQ9NQ60 294 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SIRT3Q9NTG7 399 aaPredicted RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 UCKL1Q9NWZ5 548 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 PDP1Q9P0J1 537 aaPredicted RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 PTGFRNQ9P2B2 879 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 NDOR1Q9UHB4 597 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SERTAD3Q9UJW9 196 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 KLK13Q9UKR3 277 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 CES1P1Q9UKY3 287 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 TMCC3Q9ULS5 477 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 CDC14AQ9UNH5 594 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 ZNF232Q9UNY5 417 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 WASF3Q9UPY6 502 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 ERVK-11Q9UQG0 969 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 MYRFQ9Y2G1 1151 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SH3GLB1Q9Y371 365 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 RNF215Q9Y6U7 377 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 A0A0G2JPF8 293 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 HNRNPCL2B2RXH8 293 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 HNRNPCL3B7ZW38 293 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 C4orf51C9J302 202 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 HMGN4O00479 90 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 ACOX3O15254 700 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 CHST10O43529 356 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 DYRK3O43781 588 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 DKK1O94907 266 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 SOX30O94993 753 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 PRSS23O95084 383 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 PGM3O95394 542 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 GPR75O95800 540 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 C9P02748 559 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 GP1BAP07359 652 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 HNRNPCL4P0DMR1 293 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 CPMP14384 443 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 DCTP40126 519 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 MAGEA2P43356 314 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 MVDP53602 400 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 KCNJ10P78508 379 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 HSD11B2P80365 405 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 SPIBQ01892 262 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 KCNC4Q03721 635 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 LASP1Q14847 261 aaKnown RBP8.72□□□□□ -1.01
SS18-220ENST00000582092 NR0B2Q15466 257 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 ZNF750Q32MQ0 723 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 PROX2Q3B8N5 592 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 NKAIN2Q5VXU1 208 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 DHRS13Q6UX07 377 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 USP53Q70EK8 1073 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 KANSL1Q7Z3B3 1105 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 OR4N5Q8IXE1 308 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 C8orf59Q8N0T1 100 aaPredicted RBP8.72□□□□□ -1.01
SS18-220ENST00000582092 CA13Q8N1Q1 262 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 ZNF786Q8N393 782 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 SLC25A45Q8N413 288 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 DNAJC22Q8N4W6 341 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 SMYD1Q8NB12 490 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 C7orf57Q8NEG2 295 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 OR9A4Q8NGU2 314 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 GIPC3Q8TF64 312 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 SLC9A6Q92581 669 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 TFAP2CQ92754 450 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 NAT6Q93015 286 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 TBC1D20Q96BZ9 403 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 ELP4Q96EB1 424 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 MMABQ96EY8 250 aaPredicted RBP8.72□□□□□ -1.01
SS18-220ENST00000582092 RMND5BQ96G75 393 aaPredicted RBP8.72□□□□□ -1.01
SS18-220ENST00000582092 TMEM19Q96HH6 336 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 COL21A1Q96P44 957 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 EPYCQ99645 322 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 TWSG1Q9GZX9 223 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 RAB33BQ9H082 229 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 NTN4Q9HB63 628 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 FAM60AQ9NP50 221 aa8.72□□□□□ -1.01
SS18-220ENST00000582092 TOR4AQ9NXH8 423 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms