RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 COPS7BQ9H9Q2 264 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 SLC9A8Q9Y2E8 581 aa2.2□□□□□ -2.06
SMCHD1-206ENST00000581631 G3V3Y1 287 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 REC8O95072 547 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 VCLP18206 1134 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 ACP1P24666 158 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 PTPN4P29074 926 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 SMSP52788 366 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 RIPK4P57078 832 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 HERV-K104P63124 156 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 CDKL1Q00532 357 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 ZNF33BQ06732 778 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 CD47Q08722 323 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 OVGP1Q12889 678 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 SERTAD2Q14140 314 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 GK2Q14410 553 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 KRT31Q15323 416 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 HAGHQ16775 308 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 EPC2Q52LR7 807 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 IFI44LQ53G44 452 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 ARMC3Q5W041 872 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 ZNF530Q6P9A1 599 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 MFSD7Q6UXD7 560 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 STOX1Q6ZVD7 989 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 ASRGL1Q7L266 308 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 PIWIL3Q7Z3Z3 882 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 CEND1Q8N111 149 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 SIDT2Q8NBJ9 832 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 OR2L5Q8NG80 312 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 OR13F1Q8NGS4 319 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 FIBINQ8TAL6 211 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 RDH11Q8TC12 318 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 RPGRIP1Q96KN7 1286 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 SDHCQ99643 169 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 GANQ9H2C0 597 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 MAGEF1Q9HAY2 307 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 NRN1Q9NPD7 142 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 ESM1Q9NQ30 184 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 MIEF1Q9NQG6 463 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 TUBGCP4Q9UGJ1 667 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 KLHL21Q9UJP4 597 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 RNF115Q9Y4L5 304 aa2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 CFAP65Q6ZU64 1925 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-206ENST00000581631 A0A0U1RQK1 487 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 WI2-2373I1.2A0A1W2PRP0 233 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 ZNF320A2RRD8 509 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 SMIM30A4D0T7 59 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 H0Y626 953 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 CACNB4O00305 520 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 CYB561D2O14569 222 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 STAM2O75886 525 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 PDE5AO76074 875 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 SLC2A10O95528 541 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 APBB3O95704 486 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 HSP90AB1P08238 724 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 ALPIP09923 528 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 UROSP10746 265 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 GLULP15104 373 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 SAA4P35542 130 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 ACADSBP45954 432 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 XCR1P46094 333 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 TRPC1P48995 793 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 P2RY4P51582 365 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 VCPP55072 806 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 HAND2P61296 217 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 CKAP4Q07065 602 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 EXOSC7Q15024 291 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 HKDC1Q2TB90 917 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 FAM133BQ5BKY9 247 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 HECTD3Q5T447 861 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 SLC22A10Q63ZE4 541 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 WSCD1Q658N2 575 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 ADGRD2Q7Z7M1 963 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 GPR65Q8IYL9 337 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 OR4A16Q8NH70 328 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 CCDC26Q8TAB7 109 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 RFESDQ8TAC1 157 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 C9orf85Q96MD7 179 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 OSBPL8Q9BZF1 889 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 CENPMQ9NSP4 180 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 PNPLA3Q9NST1 481 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 TMEM9Q9P0T7 183 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 RPS6KB2Q9UBS0 482 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 LIPT1Q9Y234 373 aa2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 FOXA2Q9Y261 457 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 MTF2Q9Y483 593 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-206ENST00000581631 ACTL6AO96019 429 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 CT45A10P0DMU9 189 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 CPN1P15169 458 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 CTNNB1P35222 781 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 TCF7P36402 384 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 ZNF131P52739 623 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 ZNF85Q03923 595 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 RCN2Q14257 317 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 CD226Q15762 336 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 ZNF658Q5TYW1 1059 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 IGFL2Q6UWQ7 119 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 NAT8LQ8N9F0 302 aa2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 TFB1MQ8WVM0 346 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-206ENST00000581631 FRAT1Q92837 279 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms