RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 PRIMA1Q86XR5 153 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 KIF18BQ86Y91 864 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 OR7G1Q8NGA0 311 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 OR4K14Q8NGD5 310 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 TRPC4APQ8TEL6 797 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 HSPBAP1Q96EW2 488 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 WDYHV1Q96HA8 205 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 TMEM41AQ96HV5 264 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 C18orf12Q96KH6 178 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 ALPK1Q96QP1 1244 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 NTMT1Q9BV86 223 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 CALHM2Q9HA72 323 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 ADAM29Q9UKF5 820 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 CBLCQ9ULV8 474 aa9.69□□□□□ -0.86
RFFL-209ENST00000581265 A0A096LPK6 155 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 MBD3L4A6NDZ8 208 aaPredicted RBP9.68□□□□□ -0.86
RFFL-209ENST00000581265 MBD3L3A6NE82 208 aaPredicted RBP9.68□□□□□ -0.86
RFFL-209ENST00000581265 TUBAL3A6NHL2 446 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 MBD3L5A6NJ08 208 aaPredicted RBP9.68□□□□□ -0.86
RFFL-209ENST00000581265 OR7A17O14581 309 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 SIX3O95343 332 aaPredicted RBP9.68□□□□□ -0.86
RFFL-209ENST00000581265 IL18BPO95998 194 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 ALDOAP04075 364 aaKnown RBP9.68□□□□□ -0.86
RFFL-209ENST00000581265 KLK1P06870 262 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 INHBBP09529 407 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 CPMP14384 443 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 PORP16435 677 aaPredicted RBP9.68□□□□□ -0.86
RFFL-209ENST00000581265 CTSSP25774 331 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 ABCD3P28288 659 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 TYK2P29597 1187 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 MASP1P48740 699 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 NAGLUP54802 743 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 ADAM8P78325 824 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 MGAT2Q10469 447 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 MAP4K2Q12851 820 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 EIPR1Q53HC9 387 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 FRG2Q64ET8 278 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 TMEM81Q6P7N7 255 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 NUP54Q7Z3B4 507 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 MBD3L2Q8NHZ7 208 aaPredicted RBP9.68□□□□□ -0.86
RFFL-209ENST00000581265 ZPLD1Q8TCW7 415 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 ABTB1Q969K4 478 aaPredicted RBP9.68□□□□□ -0.86
RFFL-209ENST00000581265 CDK15Q96Q40 435 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 FRG2BQ96QU4 278 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 UGT2B28Q9BY64 529 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 RAB17Q9H0T7 212 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 EPB41L4BQ9H329 900 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 NOL11Q9H8H0 719 aaKnown RBP9.68□□□□□ -0.86
RFFL-209ENST00000581265 AHSPQ9NZD4 102 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 JKAMPQ9P055 326 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 CES1P1Q9UKY3 287 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 PLEKHA6Q9Y2H5 1048 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 SLC6A5Q9Y345 797 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 MED12Q93074 2177 aa9.68□□□□□ -0.86
RFFL-209ENST00000581265 FLNAP21333 2647 aaKnown RBP9.68□□□□□ -0.86
RFFL-209ENST00000581265 ZNF469Q96JG9 3925 aaPredicted RBP9.67□□□□□ -0.86
RFFL-209ENST00000581265 FAM171A2A8MVW0 826 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 GUCY1B2O75343 617 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 PPM1BO75688 479 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 GOSR1O95249 250 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 ACTL6AO96019 429 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 CPN1P15169 458 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 NT5EP21589 574 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 GPX3P22352 226 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 PTPN6P29350 595 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 OPRM1P35372 400 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 SORDQ00796 357 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 C2orf54Q08AI8 447 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 SNTA1Q13424 505 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 PRICKLE4Q2TBC4 344 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 WIPI1Q5MNZ9 446 aaPredicted RBP9.67□□□□□ -0.86
RFFL-209ENST00000581265 CCNYL2Q5T2Q4 361 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 SLC30A6Q6NXT4 461 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 SLC48A1Q6P1K1 146 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 PAGE2Q7Z2X7 111 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 METTL4Q8N3J2 472 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 OR52B6Q8NGF0 335 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 OR1J4Q8NGS1 313 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 ATP6V1E2Q96A05 226 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 TRIB1Q96RU8 372 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 MRPL1Q9BYD6 325 aaKnown RBP9.67□□□□□ -0.86
RFFL-209ENST00000581265 NXF5Q9H1B4 397 aaKnown RBP9.67□□□□□ -0.86
RFFL-209ENST00000581265 CPSF2Q9P2I0 782 aaKnown RBP9.67□□□□□ -0.86
RFFL-209ENST00000581265 ZNF639Q9UID6 485 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 PYCARDQ9ULZ3 195 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 CAMK2AQ9UQM7 478 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 CFL2Q9Y281 166 aa9.67□□□□□ -0.86
RFFL-209ENST00000581265 C1orf226A1L170 272 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 STX16-NPEPL1H3BU86 382 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 STX16O14662 325 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 ACOX3O15254 700 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 ICOSLGO75144 302 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 CBR3O75828 277 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 RAF1P04049 648 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 ATP1B1P05026 303 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 HEXAP06865 529 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 RBP1P09455 135 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 RHOXF2BP0C7M4 288 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 KRT15P19012 456 aa9.66□□□□□ -0.86
RFFL-209ENST00000581265 CSNK2A2P19784 350 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms