RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ESYT2A0FGR8 921 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CCDC162PA2VCL2 907 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 METTL21EPA6NDL7 271 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ASB14A6NK59 587 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 SUPT3HB4E1H0 165 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 E5RJQ4 531 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 I6L893 689 aaPredicted RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 GAPDHSO14556 408 aaPredicted RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 KLF11O14901 512 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ARHGEF9O43307 516 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 RNF13O43567 381 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ITM2AO43736 263 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 OR1F1O43749 312 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 RANBP6O60518 1105 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 GOT2P00505 430 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CSTAP01040 98 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CGAP01215 116 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 KRT6AP02538 564 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CHRNA1P02708 482 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 FHP07954 510 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 KRT19P08727 400 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ANXA4P09525 319 aaPredicted RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ERVK-10P10266 1014 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ODC1P11926 461 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 UQCRBP14927 111 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 MSR1P21757 451 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CBLP22681 906 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CTNNA2P26232 953 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 U2AF2P26368 475 aaKnown RBP eCLIP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CHMLP26374 656 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ANXA13P27216 316 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 NMT1P30419 496 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 SRD5A2P31213 254 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 RPL3P39023 403 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ACADSBP45954 432 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 PDX1P52945 283 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 C21orf59P57076 290 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 MAP3K7CLP57077 242 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 RGS8P57771 180 aaPredicted RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 KRTAP10-3P60369 221 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 HERVK_113P63132 956 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ERVK-8P63133 956 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 TRAP1Q12931 704 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 NFATC2Q13469 925 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CUL1Q13616 776 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 MESDQ14696 234 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 HEPACAMQ14CZ8 416 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 P2RY14Q15391 338 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 EFNB3Q15768 340 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 MAPK6Q16659 721 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 DUSP6Q16828 381 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 MTHFSDQ2M296 383 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ODF4Q2M2E3 257 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ZNF585BQ52M93 769 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 FAM76BQ5HYJ3 339 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 C10orf120Q5SQS8 335 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 PIK3CD-AS1Q5SR53 167 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 LIPKQ5VXJ0 399 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 RAET1LQ5VY80 246 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 LIPJQ5W064 366 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 SHC4Q6S5L8 630 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 Q75L30 129 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CPEB2Q7Z5Q1 589 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 VSTM4Q8IW00 320 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 KATNAL2Q8IYT4 538 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 TCAIMQ8N3R3 496 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 GBGT1Q8N5D6 347 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 TRIML2Q8N7C3 387 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 PNLDC1Q8NA58 520 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 C17orf47Q8NEP4 570 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 OR4C5Q8NGB2 326 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 OR5D13Q8NGL4 314 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 OR6M1Q8NGM8 313 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 OR13J1Q8NGT2 312 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 OR9A1PQ8NGU1 263 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 OR5R1Q8NH85 324 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 C16orf52Q8NHV5 167 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM37Q8WXS4 190 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ITFG2Q969R8 447 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 EFHD2Q96C19 240 aaPredicted RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 MRPL53Q96EL3 112 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 SENP5Q96HI0 755 aaPredicted RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CXorf58Q96LI9 332 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 FAM210AQ96ND0 272 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 RPRD1AQ96P16 312 aaPredicted RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CASD1Q96PB1 797 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CCNL2Q96S94 520 aaPredicted RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 S1PR3Q99500 378 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 WDR77Q9BQA1 342 aaPredicted RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 BPIFA3Q9BQP9 254 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 CHRDL1Q9BU40 450 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 EFHD1Q9BUP0 239 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 ERVK-6Q9BXR3 956 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 NUSAP1Q9BXS6 441 aaKnown RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 VN1R1Q9GZP7 353 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 DNTTIP1Q9H147 329 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 GLT8D2Q9H1C3 349 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 POLR3FQ9H1D9 316 aaPredicted RBP2.84□□□□□ -1.95
KPNB1-208ENST00000580019 SLC26A1Q9H2B4 701 aa2.84□□□□□ -1.95
KPNB1-208ENST00000580019 TMEM185BQ9H7F4 350 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms