RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 ANGPTL8Q6UXH0 198 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 DGAT2L6Q6ZPD8 337 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 LANCL3Q6ZV70 420 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 GPR155Q7Z3F1 870 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 SZRD1Q7Z422 152 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 SERPINA11Q86U17 422 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 KIF2BQ8N4N8 673 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 MIPOL1Q8TD10 442 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 MAGED4Q96JG8 741 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 RAB3IPQ96QF0 476 aaPredicted RBP10.02□□□□□ -0.81
SS18-213ENST00000579640 LPAR4Q99677 370 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 CNPPD1Q9BV87 410 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 KAT8Q9H7Z6 458 aaKnown RBP10.02□□□□□ -0.81
SS18-213ENST00000579640 THUMPD1Q9NXG2 353 aaKnown RBP10.02□□□□□ -0.81
SS18-213ENST00000579640 PRODH2Q9UF12 536 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 FAF1Q9UNN5 650 aaPredicted RBP10.02□□□□□ -0.81
SS18-213ENST00000579640 PPIEQ9UNP9 301 aaKnown RBP10.02□□□□□ -0.81
SS18-213ENST00000579640 WASF3Q9UPY6 502 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 ERVK-19Q9WJR5 959 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 CFL2Q9Y281 166 aa10.02□□□□□ -0.81
SS18-213ENST00000579640 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.02□□□□□ -0.81
SS18-213ENST00000579640 CCDC88CQ9P219 2028 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 LOC101059948A0A1B0GTJ6 334 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 A0A1W2PQ72 361 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 CFAP73A6NFT4 308 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 SAGE2PA6NJ88 616 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 TTC36A6NLP5 189 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 A8MUA0 341 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 NME4O00746 187 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 CBX7O95931 251 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 HSD17B1P14061 328 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 S1PR1P21453 382 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 PGDP52209 483 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 PRKAG1P54619 331 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 FOXL2P58012 376 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 RGNQ15493 299 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 TBC1D25Q3MII6 688 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 PIGGQ5H8A4 983 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 RNF130Q86XS8 419 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 CLEC4FQ8N1N0 589 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 TNIP2Q8NFZ5 429 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 OR52R1Q8NGF1 315 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 SLC2A12Q8TD20 617 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 GIMAP5Q96F15 307 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 SENP5Q96HI0 755 aaPredicted RBP10.01□□□□□ -0.81
SS18-213ENST00000579640 SCNM1Q9BWG6 230 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 ACTRT3Q9BYD9 372 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 ALG2Q9H553 416 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 IKZF5Q9H5V7 419 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 GPATCH2Q9NW75 528 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 COPS7AQ9UBW8 275 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 BCAP29Q9UHQ4 241 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 MSRB2Q9Y3D2 182 aa10.01□□□□□ -0.81
SS18-213ENST00000579640 DUXAA6NLW8 204 aa10□□□□□ -0.81
SS18-213ENST00000579640 FAM220BPB1ANY3 271 aa10□□□□□ -0.81
SS18-213ENST00000579640 ASNA1O43681 348 aa10□□□□□ -0.81
SS18-213ENST00000579640 DDAH2O95865 285 aa10□□□□□ -0.81
SS18-213ENST00000579640 AGR2O95994 175 aa10□□□□□ -0.81
SS18-213ENST00000579640 IGKV3-11P04433 115 aa10□□□□□ -0.81
SS18-213ENST00000579640 HMGN2P05204 90 aaKnown RBP10□□□□□ -0.81
SS18-213ENST00000579640 BMP2P12643 396 aa10□□□□□ -0.81
SS18-213ENST00000579640 MATN1P21941 496 aa10□□□□□ -0.81
SS18-213ENST00000579640 ME2P23368 584 aa10□□□□□ -0.81
SS18-213ENST00000579640 CRATP43155 626 aa10□□□□□ -0.81
SS18-213ENST00000579640 KHKP50053 298 aa10□□□□□ -0.81
SS18-213ENST00000579640 MVDP53602 400 aa10□□□□□ -0.81
SS18-213ENST00000579640 LIPEQ05469 1076 aa10□□□□□ -0.81
SS18-213ENST00000579640 LASP1Q14847 261 aaKnown RBP10□□□□□ -0.81
SS18-213ENST00000579640 DDX59Q5T1V6 619 aaKnown RBP eCLIP10□□□□□ -0.81
SS18-213ENST00000579640 MFSD12Q6NUT3 480 aa10□□□□□ -0.81
SS18-213ENST00000579640 ERICH5Q6P6B1 374 aa10□□□□□ -0.81
SS18-213ENST00000579640 PGM2L1Q6PCE3 622 aa10□□□□□ -0.81
SS18-213ENST00000579640 PAPD4Q6PIY7 484 aaKnown RBP10□□□□□ -0.81
SS18-213ENST00000579640 CALHM3Q86XJ0 350 aa10□□□□□ -0.81
SS18-213ENST00000579640 RAB43Q86YS6 212 aa10□□□□□ -0.81
SS18-213ENST00000579640 FBXW8Q8N3Y1 598 aa10□□□□□ -0.81
SS18-213ENST00000579640 CDRT4Q8N9R6 151 aa10□□□□□ -0.81
SS18-213ENST00000579640 B3GNT7Q8NFL0 401 aa10□□□□□ -0.81
SS18-213ENST00000579640 OR1N1Q8NGS0 311 aa10□□□□□ -0.81
SS18-213ENST00000579640 OR10A6Q8NH74 314 aa10□□□□□ -0.81
SS18-213ENST00000579640 PNPT1Q8TCS8 783 aaKnown RBP10□□□□□ -0.81
SS18-213ENST00000579640 REXO5Q96IC2 774 aaKnown RBP10□□□□□ -0.81
SS18-213ENST00000579640 IP6K3Q96PC2 410 aa10□□□□□ -0.81
SS18-213ENST00000579640 OR8D2Q9GZM6 311 aa10□□□□□ -0.81
SS18-213ENST00000579640 ZNF700Q9H0M5 742 aa10□□□□□ -0.81
SS18-213ENST00000579640 OR10A5Q9H207 317 aa10□□□□□ -0.81
SS18-213ENST00000579640 GPN2Q9H9Y4 310 aaPredicted RBP10□□□□□ -0.81
SS18-213ENST00000579640 GIN1Q9NXP7 522 aa10□□□□□ -0.81
SS18-213ENST00000579640 CD300AQ9UGN4 299 aa10□□□□□ -0.81
SS18-213ENST00000579640 HS3ST3B1Q9Y662 390 aa10□□□□□ -0.81
SS18-213ENST00000579640 PRORSD1PA6NEY8 169 aa10□□□□□ -0.81
SS18-213ENST00000579640 OR6C76A6NM76 312 aa10□□□□□ -0.81
SS18-213ENST00000579640 NQO1P15559 274 aaKnown RBP10□□□□□ -0.81
SS18-213ENST00000579640 SSTR4P31391 388 aa10□□□□□ -0.81
SS18-213ENST00000579640 GSK3BP49841 420 aa10□□□□□ -0.81
SS18-213ENST00000579640 DSTNP60981 165 aa10□□□□□ -0.81
SS18-213ENST00000579640 BNIP2Q12982 314 aa10□□□□□ -0.81
SS18-213ENST00000579640 CEACAM7Q14002 265 aa10□□□□□ -0.81
SS18-213ENST00000579640 EXOSC7Q15024 291 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms