RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PRICKLE4Q2TBC4 344 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF791Q3KP31 576 aaPredicted RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ATP6AP1LQ52LC2 224 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 C4orf17Q53FE4 359 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 KANK2Q63ZY3 851 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 TMEM198Q66K66 360 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF324BQ6AW86 544 aaPredicted RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 MTFR2Q6P444 385 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 RGS9BPQ6ZS82 235 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 IKBIPQ70UQ0 350 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 SZRD1Q7Z422 152 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PACS2Q86VP3 889 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF227Q86WZ6 799 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 SPPL2CQ8IUH8 684 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PRR22Q8IZ63 422 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 FAM9CQ8IZT9 166 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF615Q8N8J6 731 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ZFP62Q8NB50 900 aaPredicted RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 OR2M7Q8NG81 312 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 OR10G3Q8NGC4 313 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 OR52R1Q8NGF1 315 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 OR9A2Q8NGT5 310 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 C16orf52Q8NHV5 167 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 MGARPQ8TDB4 240 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PPCDCQ96CD2 204 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 TUBGCP3Q96CW5 907 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 LCORQ96JN0 433 aaPredicted RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PKNOX2Q96KN3 472 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PPP1R36Q96LQ0 422 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PPP3R2Q96LZ3 170 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 GPR137Q96N19 417 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 FRMD6Q96NE9 622 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 TSSK3Q96PN8 268 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 PRPF18Q99633 342 aaKnown RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 DOHHQ9BU89 302 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 METTL7AQ9H8H3 244 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 SSU72Q9NP77 194 aaKnown RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 MYNNQ9NPC7 610 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ARGLU1Q9NWB6 273 aaPredicted RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 SIRT5Q9NXA8 310 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ALKBH4Q9NXW9 302 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 EHD3Q9NZN3 535 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 B4GALT7Q9UBV7 327 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 BAIAP2L1Q9UHR4 511 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ERRFI1Q9UJM3 462 aaPredicted RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 BOKQ9UMX3 212 aaPredicted RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 EIF3LQ9Y262 564 aaKnown RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 TMED5Q9Y3A6 229 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 OR10H1Q9Y4A9 318 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 NPFFR2Q9Y5X5 522 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ACTL7BQ9Y614 415 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.05□□□□□ -1.44
TRAF4-213ENST00000578917 ESPL1Q14674 2120 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 POLEQ07864 2286 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 SVILO95425 2214 aa6.05□□□□□ -1.44
TRAF4-213ENST00000578917 DOPEY1Q5JWR5 2465 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 A0A1B0GTH9 108 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 ZNF354AO60765 605 aaPredicted RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 COQ9O75208 318 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 LYPLA1O75608 230 aaPredicted RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 TRAPPC6AO75865 159 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 SNUPNO95149 360 aaKnown RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 SNX4O95219 450 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 TPOP07202 933 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 STSP08842 583 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 FBXO45P0C2W1 286 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 CCL3P10147 92 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 S1PR1P21453 382 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 BGNP21810 368 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 DRD5P21918 477 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 GPX3P22352 226 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 TACR1P25103 407 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 IL12BP29460 328 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 HPCAL1P37235 193 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 PPICP45877 212 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 SLC1A6P48664 564 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 DNASE1L1P49184 302 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 RPL14P50914 215 aaKnown RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 TDGF1P3P51864 188 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 PRKAG1P54619 331 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 MANFP55145 182 aaKnown RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 ABCE1P61221 599 aaKnown RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 MAGOHP61326 146 aaKnown RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 DCAF7P61962 342 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 MRPS22P82650 360 aaKnown RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 HSF1Q00613 529 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 PLCXD2Q0VAA5 305 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 HSPB3Q12988 150 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 MAD2L1Q13257 205 aaPredicted RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 RPS6KA2Q15349 733 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 ZNHIT3Q15649 155 aaPredicted RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 SPDYE7PQ495Y7 208 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 RFTN2Q52LD8 501 aaPredicted RBP6.04□□□□□ -1.44
TRAF4-213ENST00000578917 RNFT1Q5M7Z0 435 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 PRAMEF20Q5VT98 475 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 FAM71E1Q6IPT2 247 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 ANKRD26P1Q6NSI1 321 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 ARHGAP11AQ6P4F7 1023 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 TMEM107Q6UX40 140 aa6.04□□□□□ -1.44
TRAF4-213ENST00000578917 C3P1Q6ZMU1 363 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms