RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 TBCELQ5QJ74 424 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 IRAK1BP1Q5VVH5 260 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 MLIPQ5VWP3 458 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 SP5Q6BEB4 398 aaPredicted RBP9.54□□□□□ -0.88
SS18-210ENST00000578700 NIPAL1Q6NVV3 410 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 ABHD17CQ6PCB6 329 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 ANGPTL8Q6UXH0 198 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 SERPINA11Q86U17 422 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 KMT5CQ86Y97 462 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 ZGRF1Q86YA3 2104 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 MICU2Q8IYU8 434 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 PQLC1Q8N2U9 271 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 ACOT4Q8N9L9 421 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 OR5P2Q8WZ92 322 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 FIG4Q92562 907 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 TM4SF18Q96CE8 201 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 ZBED6CLQ96FA7 236 aaPredicted RBP9.54□□□□□ -0.88
SS18-210ENST00000578700 DUS3LQ96G46 650 aaKnown RBP9.54□□□□□ -0.88
SS18-210ENST00000578700 REXO5Q96IC2 774 aaKnown RBP9.54□□□□□ -0.88
SS18-210ENST00000578700 CPPED1Q9BRF8 314 aaPredicted RBP9.54□□□□□ -0.88
SS18-210ENST00000578700 SORBS1Q9BX66 1292 aaKnown RBP9.54□□□□□ -0.88
SS18-210ENST00000578700 UGT2B28Q9BY64 529 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 TRIM8Q9BZR9 551 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 KLHL4Q9C0H6 718 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 SLC6A16Q9GZN6 736 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 KAT8Q9H7Z6 458 aaKnown RBP9.54□□□□□ -0.88
SS18-210ENST00000578700 FANCEQ9HB96 536 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 NEUROD4Q9HD90 331 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 MS4A12Q9NXJ0 267 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 TAS2R9Q9NYW1 312 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 SLC25A37Q9NYZ2 338 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 EHD3Q9NZN3 535 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 SEMA5BQ9P283 1151 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 PHF11Q9UIL8 331 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 POMT2Q9UKY4 750 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 B3GNT3Q9Y2A9 372 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 CCDC88CQ9P219 2028 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 ITPR3Q14573 2671 aa9.54□□□□□ -0.88
SS18-210ENST00000578700 CNTRLQ7Z7A1 2325 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 A0A0A6YYD5 115 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 C1orf226A1L170 272 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 SLC9B1P1A6NJY1 282 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 TMEM150CB9EJG8 249 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 MASP2O00187 686 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 CXCR6O00574 342 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 B3GALT2O43825 422 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 EIF2S1P05198 315 aaKnown RBP9.53□□□□□ -0.88
SS18-210ENST00000578700 PRF1P14222 555 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 GGT1P19440 569 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 ATP6V1B2P21281 511 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 ATP5A1P25705 553 aaKnown RBP9.53□□□□□ -0.88
SS18-210ENST00000578700 BUD31P41223 144 aaPredicted RBP9.53□□□□□ -0.88
SS18-210ENST00000578700 CDKN2CP42773 168 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 PRIM2P49643 509 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 ANXA11P50995 505 aaKnown RBP9.53□□□□□ -0.88
SS18-210ENST00000578700 MANFP55145 182 aaKnown RBP9.53□□□□□ -0.88
SS18-210ENST00000578700 WNT3P56703 355 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 RAB8AP61006 207 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 BTN3A2P78410 334 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 SELPLGQ14242 412 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 FAM98BQ52LJ0 330 aaKnown RBP9.53□□□□□ -0.88
SS18-210ENST00000578700 NDUFAF5Q5TEU4 345 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 BHLHB9Q6PI77 547 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 UBE3DQ7Z6J8 389 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 RAB43Q86YS6 212 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 SAMD14Q8IZD0 417 aaPredicted RBP9.53□□□□□ -0.88
SS18-210ENST00000578700 CLECL1Q8IZS7 167 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 FAM47BQ8NA70 645 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 OR8K5Q8NH50 307 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 GOT1L1Q8NHS2 421 aaPredicted RBP9.53□□□□□ -0.88
SS18-210ENST00000578700 FLVCR1-AS1Q8TAF5 88 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 DNAJC9Q8WXX5 260 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 N4BP2L2Q92802 583 aaPredicted RBP9.53□□□□□ -0.88
SS18-210ENST00000578700 MIEF2Q96C03 454 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 AURKBQ96GD4 344 aaPredicted RBP9.53□□□□□ -0.88
SS18-210ENST00000578700 ZNF583Q96ND8 569 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 OR2A5Q96R48 311 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 BBS4Q96RK4 519 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 SERINC2Q96SA4 455 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 CD180Q99467 661 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 KLHL25Q9H0H3 589 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 GORASP2Q9H8Y8 452 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 TPT1P8Q9HAU6 139 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 ARMC1Q9NVT9 282 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 C5AR2Q9P296 337 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 ENTPD4Q9Y227 616 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 OSGIN2Q9Y236 505 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 ZNF780BQ9Y6R6 833 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 SVILO95425 2214 aa9.53□□□□□ -0.88
SS18-210ENST00000578700 F8P00451 2351 aa9.52□□□□□ -0.88
SS18-210ENST00000578700 A0A0G2JN53 185 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 TMEM247A6NEH6 219 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 C9J4A7 227 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 H3BNX3 289 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 PEX12O00623 359 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 LRRTM2O43300 516 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 PEX1O43933 1283 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 SCN2BO60939 215 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 C6orf47O95873 294 aa9.52□□□□□ -0.89
SS18-210ENST00000578700 TBX6O95947 436 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms