RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 ADCY4Q8NFM4 1077 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 OR9A2Q8NGT5 310 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 THAP3Q8WTV1 239 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-213ENST00000573577 CTHRC1Q96CG8 243 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 TCF7L2Q9NQB0 619 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 AGPAT4Q9NRZ5 378 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 ACSS1Q9NUB1 689 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-213ENST00000573577 ANKRD10Q9NXR5 420 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 MYOTQ9UBF9 498 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 PRODH2Q9UF12 536 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 BCAP29Q9UHQ4 241 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 YARS2Q9Y2Z4 477 aaKnown RBP12.55□□□□□ -0.4
RPAIN-213ENST00000573577 RP1L1Q8IWN7 2480 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-213ENST00000573577 CROCCQ5TZA2 2017 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 A0A087WV62 115 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 HRKO00198 91 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 UBDO15205 165 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 PLOD3O60568 738 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 ITGA10O75578 1167 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 ZIC2O95409 532 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-213ENST00000573577 IFI6P09912 130 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 CT62P0C5K7 136 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 TROVE2P10155 538 aaKnown RBP eCLIP12.54□□□□□ -0.4
RPAIN-213ENST00000573577 SSTR4P31391 388 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 CD96P40200 585 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 MDH1P40925 334 aaKnown RBP12.54□□□□□ -0.4
RPAIN-213ENST00000573577 ST13P50502 369 aaKnown RBP12.54□□□□□ -0.4
RPAIN-213ENST00000573577 SSR4P51571 173 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 AQP5P55064 265 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 MANFP55145 182 aaKnown RBP12.54□□□□□ -0.4
RPAIN-213ENST00000573577 GUCY1A3Q02108 690 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 OC90Q02509 493 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-213ENST00000573577 SRSF11Q05519 484 aaKnown RBP12.54□□□□□ -0.4
RPAIN-213ENST00000573577 DUSP2Q05923 314 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 MGAT2Q10469 447 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 LTB4RQ15722 352 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 GSTA3Q16772 222 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 MPEG1Q2M385 716 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 LSM12Q3MHD2 195 aaKnown RBP12.54□□□□□ -0.4
RPAIN-213ENST00000573577 ANKRD26P1Q6NSI1 321 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 FAM180AQ6UWF9 173 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 CAMKMTQ7Z624 323 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 RIMKLAQ8IXN7 391 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 C9orf40Q8IXQ3 194 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 TMEM156Q8N614 296 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 KRTCAP2Q8N6L1 136 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 MDS2Q8NDY4 140 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 OR7A2PQ8NGA2 310 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 GRHL3Q8TE85 626 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 DOK4Q8TEW6 326 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 STON2Q8WXE9 905 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 AMDHD1Q96NU7 426 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 GAL3ST4Q96RP7 486 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 ZBTB18Q99592 522 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 CCDC28BQ9BUN5 200 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 BHLHE41Q9C0J9 482 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-213ENST00000573577 GLIPR2Q9H4G4 154 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 CCDC134Q9H6E4 229 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 AIG1Q9NVV5 245 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF639Q9UID6 485 aa12.54□□□□□ -0.4
RPAIN-213ENST00000573577 SHANK1Q9Y566 2161 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 C2orf92A0A1B0GVN3 265 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 PLOD2O00469 737 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 PRKNO60260 465 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-213ENST00000573577 COQ9O75208 318 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 VIMP08670 466 aaKnown RBP12.53□□□□□ -0.4
RPAIN-213ENST00000573577 ALDOCP09972 364 aaKnown RBP12.53□□□□□ -0.4
RPAIN-213ENST00000573577 S1PR1P21453 382 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 TRHRP34981 398 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-213ENST00000573577 GPC1P35052 558 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 FRKP42685 505 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-213ENST00000573577 CYB561P49447 251 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 IDH3AP50213 366 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 MRPS35P82673 323 aaKnown RBP12.53□□□□□ -0.4
RPAIN-213ENST00000573577 HSPB3Q12988 150 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 MRPL49Q13405 166 aaKnown RBP12.53□□□□□ -0.4
RPAIN-213ENST00000573577 MLC1Q15049 377 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 EBPQ15125 230 aaKnown RBP12.53□□□□□ -0.4
RPAIN-213ENST00000573577 OR1C1Q15619 314 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 PRSS53Q2L4Q9 553 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 TRMT12Q53H54 448 aaKnown RBP12.53□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF385BQ569K4 471 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF766Q5HY98 468 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 FAM111BQ6SJ93 734 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 GPALPP1Q8IXQ4 340 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 TAGAPQ8N103 731 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 SLC15A4Q8N697 577 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF615Q8N8J6 731 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF454Q8N9F8 522 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 C17orf47Q8NEP4 570 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 VPS37AQ8NEZ2 397 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 OR52R1Q8NGF1 315 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 C16orf52Q8NHV5 167 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 SLC22A8Q8TCC7 542 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 FAR1Q8WVX9 515 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 ASB15Q8WXK1 588 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 KAT2AQ92830 837 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 TP53INP1Q96A56 240 aa12.53□□□□□ -0.4
RPAIN-213ENST00000573577 CIDECQ96AQ7 238 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-213ENST00000573577 TESCQ96BS2 214 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms