RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 RFXAPO00287 272 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 MAN2B1O00754 1011 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 LRRTM2O43300 516 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 DDX5P17844 614 aaKnown RBP10.58□□□□□ -0.72
RPAIN-212ENST00000573126 NTSP30990 170 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 GSTM5P46439 218 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 GIPRP48546 466 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 RAB28P51157 221 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 SMIM11AP58511 58 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 KRT33BQ14525 404 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 SLC9A5Q14940 896 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 NCF4Q15080 339 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 IRF4Q15306 451 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 GPAT3Q53EU6 434 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 TOR1AIP1Q5JTV8 583 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 MEDAGQ5VYS4 303 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 C18orf63Q68DL7 685 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 LAX1Q8IWV1 398 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 SP7Q8TDD2 431 aaPredicted RBP10.58□□□□□ -0.72
RPAIN-212ENST00000573126 GPR151Q8TDV0 419 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 JPH3Q8WXH2 748 aaPredicted RBP10.58□□□□□ -0.72
RPAIN-212ENST00000573126 SMARCD2Q92925 531 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 RAB7BQ96AH8 199 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 ZG16BQ96DA0 208 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 EGLN3Q9H6Z9 239 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 TAS2R7Q9NYW3 318 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 A0A0C4DFX4 3053 aa10.58□□□□□ -0.72
RPAIN-212ENST00000573126 EYSQ5T1H1 3165 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 A0A1W2PR48 441 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 PLD2O14939 933 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 CLEC3AO75596 197 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 MAGEA8P43361 318 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 RAB8AP61006 207 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 C1DQ13901 141 aaKnown RBP10.57□□□□□ -0.72
RPAIN-212ENST00000573126 FGL2Q14314 439 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 SNAPC1Q16533 368 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 KIAA1161Q6NSJ0 714 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 USP30Q70CQ3 517 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 GET4Q7L5D6 327 aaPredicted RBP10.57□□□□□ -0.72
RPAIN-212ENST00000573126 PHC2Q8IXK0 858 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 FBXL6Q8N531 539 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 NANOGP1Q8N7R0 232 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 SUN3Q8TAQ9 357 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 TXNDC15Q96J42 360 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 CAMK1GQ96NX5 476 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 SYNPO2LQ9H987 977 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 NDUFB11Q9NX14 153 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 ADAM29Q9UKF5 820 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 LINC00854A0A1B0GVQ3 168 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 CERS1P27544 350 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 ETV5P41161 510 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 ETV6P41212 452 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 ETV1P50549 477 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 DEFA1P59665 94 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 DEFA3P59666 94 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 PDGFRLQ15198 375 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 ATAT1Q5SQI0 421 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 OR2G6Q5TZ20 316 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 RAB42Q8N4Z0 105 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 ACOT4Q8N9L9 421 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 MORN4Q8NDC4 146 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 PROKR2Q8NFJ6 384 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 OR52I1Q8NGK6 324 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 OR9Q1Q8NGQ5 310 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 FAIM2Q9BWQ8 316 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 TEX101Q9BY14 249 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 MRPS30Q9NP92 439 aaKnown RBP10.57□□□□□ -0.72
RPAIN-212ENST00000573126 FBXL12Q9NXK8 326 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 CNIH4Q9P003 139 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 CRNNQ9UBG3 495 aaPredicted RBP10.57□□□□□ -0.72
RPAIN-212ENST00000573126 SEC14L4Q9UDX3 406 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 KLHL3Q9UH77 587 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 STUB1Q9UNE7 303 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.57□□□□□ -0.72
RPAIN-212ENST00000573126 YARS2Q9Y2Z4 477 aaKnown RBP10.57□□□□□ -0.72
RPAIN-212ENST00000573126 ATG2BQ96BY7 2078 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 SPTBN5Q9NRC6 3674 aaKnown RBP10.57□□□□□ -0.72
RPAIN-212ENST00000573126 KIF26AQ9ULI4 1882 aaPredicted RBP10.57□□□□□ -0.72
RPAIN-212ENST00000573126 SLITRK5O94991 958 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 LGI1O95970 557 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 DRD2P14416 443 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 HIST1H1TP22492 207 aaPredicted RBP10.57□□□□□ -0.72
RPAIN-212ENST00000573126 SOX9P48436 509 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 MAN2A2P49641 1150 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 KHKP50053 298 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 HOXC5Q00444 222 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 MLLT1Q03111 559 aaPredicted RBP10.57□□□□□ -0.72
RPAIN-212ENST00000573126 MAP4K2Q12851 820 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 HYAL2Q12891 473 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 MADCAM1Q13477 382 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 MLC1Q15049 377 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 CST6Q15828 149 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 CLEC12AQ5QGZ9 265 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 TMEM240Q5SV17 173 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 SHFQ7M4L6 423 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 TMEM145Q8NBT3 493 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 SLC9A6Q92581 669 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 MS4A6EQ96DS6 147 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 CHFRQ96EP1 664 aa10.57□□□□□ -0.72
RPAIN-212ENST00000573126 ZNF582Q96NG8 517 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms