RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 SLC26A5P58743 744 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 ERVK-8P63133 956 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 EMX2Q04743 252 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 MAD2L1Q13257 205 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-205ENST00000571028 C3AR1Q16581 482 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 PRSS53Q2L4Q9 553 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 FCRLBQ6BAA4 426 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 DGAT2L6Q6ZPD8 337 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 CCDC116Q8IYX3 515 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 KIF2BQ8N4N8 673 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 SIRT6Q8N6T7 355 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 NUDT8Q8WV74 236 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 METTL2AQ96IZ6 378 aaKnown RBP12.36□□□□□ -0.43
CCDC40-205ENST00000571028 FCRL1Q96LA6 429 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 IMMP1LQ96LU5 166 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 OR52B2Q96RD2 323 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 CNPPD1Q9BV87 410 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 BRINP2Q9C0B6 783 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 KCNK13Q9HB14 408 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 ADAP2Q9NPF8 381 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 GIMAP4Q9NUV9 329 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 FGFR1OP2Q9NVK5 253 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 NOP53Q9NZM5 478 aaKnown RBP12.36□□□□□ -0.43
CCDC40-205ENST00000571028 SH3BP4Q9P0V3 963 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 DCTN4Q9UJW0 460 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 CES1P1Q9UKY3 287 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 SVILO95425 2214 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 SERPINA7P05543 415 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 PRR35P0CG20 571 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 ITGAMP11215 1152 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 PORP16435 677 aaPredicted RBP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 CSNK2A2P19784 350 aaPredicted RBP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 EFNA1P20827 205 aaPredicted RBP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 GSTM5P46439 218 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 ASMTP46597 345 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 DUSP2Q05923 314 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 ZNF267Q14586 743 aaPredicted RBP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 PTGR1Q14914 329 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 ELAVL1Q15717 326 aaKnown RBP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 LTB4RQ15722 352 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 EXT1Q16394 746 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 TMEM198Q66K66 360 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 RGS9BPQ6ZS82 235 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 ACAD11Q709F0 780 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 IKBIPQ70UQ0 350 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 LARP4Q71RC2 724 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 KRTCAP2Q8N6L1 136 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 ZNF321PQ8N8H1 164 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 ADCY4Q8NFM4 1077 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 RFWD2Q8NHY2 731 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 BRIX1Q8TDN6 353 aaKnown RBP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 THAP3Q8WTV1 239 aaPredicted RBP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 PTPMT1Q8WUK0 201 aaPredicted RBP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 HAS2Q92819 552 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 DAZLQ92904 295 aaKnown RBP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 RIT1Q92963 219 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 NCLNQ969V3 563 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 PPCDCQ96CD2 204 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 CNRIP1Q96F85 164 aaPredicted RBP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 BBS4Q96RK4 519 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 EBF4Q9BQW3 602 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 REEP4Q9H6H4 257 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 SLC35C2Q9NQQ7 365 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 EXO1Q9UQ84 846 aaKnown RBP12.35□□□□□ -0.43
CCDC40-205ENST00000571028 ZGRF1Q86YA3 2104 aa12.35□□□□□ -0.43
CCDC40-205ENST00000571028 NUP210LQ5VU65 1888 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 TRBV11-1A0A0K0K1C0 115 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 E9PBE3 544 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 HRKO00198 91 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 ZNF195O14628 629 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 DYRK3O43781 588 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 SLC35E2P0CK97 266 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 ICAM2P13598 275 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 NTSP30990 170 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 HPCAL1P37235 193 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 IDH3AP50213 366 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 NCBP2P52298 156 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 IGLV3-21P80748 117 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 SRSF11Q05519 484 aaKnown RBP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 RPS6KA2Q15349 733 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 PGS1Q32NB8 556 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 LSM12Q3MHD2 195 aaKnown RBP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 C6orf163Q5TEZ5 329 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 PLAG1Q6DJT9 500 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 FAM111BQ6SJ93 734 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 EPGNQ6UW88 154 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 SPATA19Q7Z5L4 167 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 LRRC34Q8IZ02 419 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 ST13P4Q8IZP2 240 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 LRRC25Q8N386 305 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 CHDHQ8NE62 594 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 NFAM1Q8NET5 270 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 B3GNT7Q8NFL0 401 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 OR7A2PQ8NGA2 310 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 SLC2A12Q8TD20 617 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 CA5BP1Q8WTZ4 195 aa12.34□□□□□ -0.43
CCDC40-205ENST00000571028 CIDECQ96AQ7 238 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 SENP5Q96HI0 755 aaPredicted RBP12.34□□□□□ -0.43
CCDC40-205ENST00000571028 RILPQ96NA2 401 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms