RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 LTB4RQ15722 352 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 GALNTL6Q49A17 601 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 ZNF628Q5EBL2 1059 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 SLC22A10Q63ZE4 541 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 SIAH3Q8IW03 269 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 ZFP62Q8NB50 900 aaPredicted RBP12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 ERP27Q96DN0 273 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 EGLN2Q96KS0 407 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 PPP3R2Q96LZ3 170 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 GPR137Q96N19 417 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 BBS4Q96RK4 519 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 COL12A1Q99715 3063 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 TMBIM4Q9HC24 238 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 SACM1LQ9NTJ5 587 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 DEPPQ9NTK1 212 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 PRODH2Q9UF12 536 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 NPIPA1Q9UND3 350 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 EXO1Q9UQ84 846 aaKnown RBP12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 SLC5A6Q9Y289 635 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 NPFFR2Q9Y5X5 522 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 PTPN13Q12923 2485 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 MYO1GB0I1T2 1018 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 ASNA1O43681 348 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 ITM2AO43736 263 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 LYPLA1O75608 230 aaPredicted RBP12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 WISP2O76076 250 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 CBX7O95931 251 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 STSP08842 583 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 PCSK2P16519 638 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 GPX3P22352 226 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 SLC18A1P54219 525 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 NRG3P56975 720 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 DCAF7P61962 342 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 RPL38P63173 70 aaKnown RBP12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 NTRK2Q16620 822 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 XKR7Q5GH72 579 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 RNFT1Q5M7Z0 435 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 HHATQ5VTY9 493 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 CES4AQ5XG92 561 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 BNC2Q6ZN30 1099 aaPredicted RBP12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 FAM47EQ6ZV65 393 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 FAM9CQ8IZT9 166 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 OR2M7Q8NG81 312 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 OR52R1Q8NGF1 315 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 OR9A2Q8NGT5 310 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 PAQR8Q8TEZ7 354 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 KAT2AQ92830 837 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 PAIP2Q9BPZ3 127 aaKnown RBP12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 FAM173AQ9BQD7 235 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 TSPAN10Q9H1Z9 355 aaPredicted RBP12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 SH2D2AQ9NP31 389 aa12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.74□□□□□ -0.37
HERPUD1-218ENST00000569569 FLNBO75369 2602 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 TMEM120BA0PK00 339 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 TP53I11O14683 189 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 TFECO14948 347 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 PLOD3O60568 738 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 SKAP2O75563 359 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 SLITRK5O94991 958 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 JUNP05412 331 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 CCL3P10147 92 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 SDC1P18827 310 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 MAPK1P28482 360 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 NTSP30990 170 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 RFC3P40938 356 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 ASMTP46597 345 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 SLC1A6P48664 564 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 TMED10P49755 219 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 EMDP50402 254 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 NCBP2P52298 156 aaKnown RBP eCLIP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 MAGOHP61326 146 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 DUSP8Q13202 625 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 STX3Q13277 289 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 PRSS53Q2L4Q9 553 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.73□□□□□ -0.377e-6■■□□□ 14.4
HERPUD1-218ENST00000569569 ATP6AP1LQ52LC2 224 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 C4orf17Q53FE4 359 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 RGS9BPQ6ZS82 235 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 GK5Q6ZS86 529 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 KIRREL3Q8IZU9 778 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 GHDCQ8N2G8 530 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 ANKRD42Q8N9B4 389 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 SIMC1Q8NDZ2 872 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 SSC4DQ8WTU2 575 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 GFM2Q969S9 779 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 TLCD1Q96CP7 247 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 HSPBAP1Q96EW2 488 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 LCORQ96JN0 433 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 C3orf30Q96M34 536 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 TSSK3Q96PN8 268 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 C20orf27Q9GZN8 174 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 NXF5Q9H1B4 397 aaKnown RBP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 ZNF395Q9H8N7 513 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 CNIH4Q9P003 139 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 BAIAP2L1Q9UHR4 511 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 ERRFI1Q9UJM3 462 aaPredicted RBP12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 DTX4Q9Y2E6 619 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 RAP2CQ9Y3L5 183 aa12.73□□□□□ -0.37
HERPUD1-218ENST00000569569 A0A1B0GUH1 482 aa12.72□□□□□ -0.37
HERPUD1-218ENST00000569569 ATP6AP2A0A1C7CYW4 349 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms