RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 LRRTM2O43300 516 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 PRKNO60260 465 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-225ENST00000569245 GPR75O95800 540 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 AIFM1O95831 613 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 DDAH2O95865 285 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 BCKDHAP12694 445 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 DIO3P55073 304 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 RAE1P78406 368 aaKnown RBP13.43□□□□□ -0.26
COMMD4-225ENST00000569245 PDCD4Q53EL6 469 aaKnown RBP13.43□□□□□ -0.26
COMMD4-225ENST00000569245 MRM1Q6IN84 353 aaKnown RBP13.43□□□□□ -0.26
COMMD4-225ENST00000569245 NOXRED1Q6NXP6 359 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 FAM9CQ8IZT9 166 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 CYP4Z2PQ8N1L4 340 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 ARMC10Q8N2F6 343 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 C1orf52Q8N6N3 182 aaKnown RBP13.43□□□□□ -0.26
COMMD4-225ENST00000569245 ZNF321PQ8N8H1 164 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 OR5L2Q8NGL0 311 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 DOK4Q8TEW6 326 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 ASB15Q8WXK1 588 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 SENP5Q96HI0 755 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-225ENST00000569245 MARK4Q96L34 752 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 CNPPD1Q9BV87 410 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 MYOTQ9UBF9 498 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 MCM8Q9UJA3 840 aa13.43□□□□□ -0.26
COMMD4-225ENST00000569245 POLR3HQ9Y535 204 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-225ENST00000569245 UTP20O75691 2785 aaKnown RBP13.42□□□□□ -0.26
COMMD4-225ENST00000569245 A8MVJ9 347 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 CAPN14A8MX76 684 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 NPIPA5E9PKD4 350 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 KLRC4-KLRK1H3BQV0 150 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 NME2P1O60361 137 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 GUCY1B2O75343 617 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 G6PDP11413 515 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 GPX3P22352 226 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 NME2P22392 152 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 PIK3R1P27986 724 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 TIA1P31483 386 aaKnown RBP eCLIP13.42□□□□□ -0.26
COMMD4-225ENST00000569245 TDGF1P3P51864 188 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 MAPK12P53778 367 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 STX1BP61266 288 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 RNF4P78317 190 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 IGLV3-21P80748 117 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-225ENST00000569245 RBPJQ06330 500 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 KLF10Q13118 480 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 KRT72Q14CN4 511 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 OR52E8Q6IFG1 317 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 IL20RBQ6UXL0 311 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 COMMD6Q7Z4G1 85 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 ST13P4Q8IZP2 240 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-225ENST00000569245 MIER2Q8N344 545 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 RIT1Q92963 219 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 UCN3Q969E3 161 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 ART5Q96L15 291 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 PSMG3-AS1Q96PY0 264 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 PELOQ9BRX2 385 aaKnown RBP13.42□□□□□ -0.26
COMMD4-225ENST00000569245 TSPAN10Q9H1Z9 355 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-225ENST00000569245 TRIM45Q9H8W5 580 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-225ENST00000569245 TIMMDC1Q9NPL8 285 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 HPF1Q9NWY4 346 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 ZIM2Q9NZV7 527 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 ARMCX1Q9P291 453 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 NPIPA1Q9UND3 350 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 DLGAP4Q9Y2H0 992 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 KLF13Q9Y2Y9 288 aaPredicted RBP13.42□□□□□ -0.26
COMMD4-225ENST00000569245 CAPN7Q9Y6W3 813 aa13.42□□□□□ -0.26
COMMD4-225ENST00000569245 PTPN13Q12923 2485 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 TMEM200CA6NKL6 621 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 ANKRD28O15084 1053 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 PGRMC2O15173 223 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 PCDH7O60245 1069 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 SDC1P18827 310 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 PER3P56645 1201 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 ZNF267Q14586 743 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-225ENST00000569245 RPS6KA2Q15349 733 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 C4orf17Q53FE4 359 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 NDUFAF5Q5TEU4 345 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 C1QL3Q5VWW1 255 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 DGAT2L6Q6ZPD8 337 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 ZNF227Q86WZ6 799 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 TREML1Q86YW5 311 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 GPALPP1Q8IXQ4 340 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 LIX1Q8N485 282 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 OR4K14Q8NGD5 310 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 OR8K3Q8NH51 312 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 ZNF721Q8TF20 911 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 FRMD6Q96NE9 622 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 RASL10BQ96S79 203 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.41□□□□□ -0.26
COMMD4-225ENST00000569245 TEX10Q9NXF1 929 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-225ENST00000569245 WBP11Q9Y2W2 641 aaKnown RBP13.41□□□□□ -0.26
COMMD4-225ENST00000569245 CPAMD8Q8IZJ3 1885 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 DOPEY2Q9Y3R5 2298 aa13.41□□□□□ -0.26
COMMD4-225ENST00000569245 USP9YO00507 2555 aaPredicted RBP13.4□□□□□ -0.26
COMMD4-225ENST00000569245 TRGV8A0A0C4DH27 118 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 A0A1B0GUH1 482 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 A1L4Q6 167 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 ASPDHA6ND91 283 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 HRKO00198 91 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 PEX1O43933 1283 aa13.4□□□□□ -0.26
COMMD4-225ENST00000569245 OR6B1O95007 311 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms