RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 TMEM178AQ8NBL3 297 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 OR7G2Q8NG99 324 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 OR7A2PQ8NGA2 310 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 RAB3IL1Q8TBN0 382 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 ZNF675Q8TD23 568 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 FAR1Q8WVX9 515 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 TP53INP1Q96A56 240 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 TMEM125Q96AQ2 219 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 CIDECQ96AQ7 238 aaPredicted RBP12.02□□□□□ -0.49
CNOT1-213ENST00000568158 MAGED4Q96JG8 741 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 BARD1Q99728 777 aaKnown RBP12.02□□□□□ -0.49
CNOT1-213ENST00000568158 MARCOQ9UEW3 520 aaPredicted RBP12.02□□□□□ -0.49
CNOT1-213ENST00000568158 VPS4AQ9UN37 437 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 EIF3LQ9Y262 564 aaKnown RBP12.02□□□□□ -0.49
CNOT1-213ENST00000568158 PCDHGB6Q9Y5F9 930 aa12.02□□□□□ -0.49
CNOT1-213ENST00000568158 SDHDO14521 159 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 NME2P1O60361 137 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 TBX19O60806 448 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 GPX3P22352 226 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 NME2P22392 152 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 GNLYP22749 145 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 MST1P26927 711 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 ASMTP46597 345 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 GPR85P60893 370 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 MRPL49Q13405 166 aaKnown RBP12.01□□□□□ -0.49
CNOT1-213ENST00000568158 PTGR1Q14914 329 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 ZNF791Q3KP31 576 aaPredicted RBP12.01□□□□□ -0.49
CNOT1-213ENST00000568158 FHL5Q5TD97 284 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 ZNF324BQ6AW86 544 aaPredicted RBP12.01□□□□□ -0.49
CNOT1-213ENST00000568158 OPN5Q6U736 354 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 FAM180AQ6UWF9 173 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 LARP4Q71RC2 724 aaKnown RBP eCLIP12.01□□□□□ -0.49
CNOT1-213ENST00000568158 PRR22Q8IZ63 422 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 SLC15A4Q8N697 577 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 KRTCAP2Q8N6L1 136 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 SLC22A8Q8TCC7 542 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 PPCDCQ96CD2 204 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 AMDHD1Q96NU7 426 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 ITPAQ9BY32 194 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 NXF5Q9H1B4 397 aaKnown RBP12.01□□□□□ -0.49
CNOT1-213ENST00000568158 WDR55Q9H6Y2 383 aaPredicted RBP12.01□□□□□ -0.49
CNOT1-213ENST00000568158 MEAF6Q9HAF1 191 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 AGPAT4Q9NRZ5 378 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 DEPPQ9NTK1 212 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 ATP6V1HQ9UI12 483 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 NUP214P35658 2090 aaPredicted RBP12.01□□□□□ -0.49
CNOT1-213ENST00000568158 NINQ8N4C6 2090 aa12.01□□□□□ -0.49
CNOT1-213ENST00000568158 NBASA2RRP1 2371 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 GOLGA8QA0A0J9YX86 632 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 GOLGA8OA6NCC3 632 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 GOLGA8NF8WBI6 632 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 G3V3Y1 287 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 KLF11O14901 512 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 HDAC3O15379 428 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 PDPK1O15530 556 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 PEX1O43933 1283 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 PLOD3O60568 738 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 BCAS2O75934 225 aaPredicted RBP12□□□□□ -0.49
CNOT1-213ENST00000568158 CBX6O95503 412 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 LAMP1P11279 417 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 LBPP18428 481 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 NTSP30990 170 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 UQCRFS1P47985 274 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 DIO3P55073 304 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 MANFP55145 182 aaKnown RBP12□□□□□ -0.49
CNOT1-213ENST00000568158 PDE7AQ13946 482 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 NNATQ16517 81 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 SMU1Q2TAY7 513 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 EIF2S3LQ2VIR3 472 aaKnown RBP12□□□□□ -0.49
CNOT1-213ENST00000568158 TMEM107Q6UX40 140 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 ATCAYQ86WG3 371 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 ZGRF1Q86YA3 2104 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 GPALPP1Q8IXQ4 340 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 KIRREL3Q8IZU9 778 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 CPSF7Q8N684 471 aaKnown RBP12□□□□□ -0.49
CNOT1-213ENST00000568158 BCORP1Q8N888 145 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 GALNT11Q8NCW6 608 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 PSD4Q8NDX1 1056 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 OR5M3Q8NGP4 307 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 DNAJB8Q8NHS0 232 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 ELP4Q96EB1 424 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 TIMMDC1Q9NPL8 285 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 NPFFR2Q9Y5X5 522 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 SVILO95425 2214 aa12□□□□□ -0.49
CNOT1-213ENST00000568158 PINLYPA6NC86 204 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 KLRC4-KLRK1H3BQV0 150 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 UPK1AO00322 258 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 PLOD2O00469 737 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 ZNF195O14628 629 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 SCAMP2O15127 329 aaKnown RBP11.99□□□□□ -0.49
CNOT1-213ENST00000568158 CRYABP02511 175 aaKnown RBP11.99□□□□□ -0.49
CNOT1-213ENST00000568158 FBXO45P0C2W1 286 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 CCL3P10147 92 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 CNR1P21554 472 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 EPHA3P29320 983 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 RFC3P40938 356 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 MC3RP41968 323 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 PPICP45877 212 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 MEOX1P50221 254 aa11.99□□□□□ -0.49
CNOT1-213ENST00000568158 CLDN8P56748 225 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms