RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 REXO5Q96IC2 774 aaKnown RBP9.78□□□□□ -0.84
TCF4-236ENST00000567880 SLC35G5Q96KT7 338 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 PTCHD1Q96NR3 888 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 OR1F2PQ96R84 312 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 YIPF4Q9BSR8 244 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 ULBP3Q9BZM4 244 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 RAD21L1Q9H4I0 556 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 EPS8L2Q9H6S3 715 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 NECTIN3Q9NQS3 549 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 FBXO8Q9NRD0 319 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 LANCL2Q9NS86 450 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 ACTR3BQ9P1U1 418 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 BCAP29Q9UHQ4 241 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 FAF1Q9UNN5 650 aaPredicted RBP9.78□□□□□ -0.84
TCF4-236ENST00000567880 PCDHGA1Q9Y5H4 931 aa9.78□□□□□ -0.84
TCF4-236ENST00000567880 CFAP54Q96N23 3096 aa9.77□□□□□ -0.84
TCF4-236ENST00000567880 SDK2Q58EX2 2172 aa9.77□□□□□ -0.84
TCF4-236ENST00000567880 PMS2P1A4D2B8 440 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 ENO4A6NNW6 628 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 UPK1AO00322 258 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 SMAD7O15105 426 aaKnown RBP9.77□□□□□ -0.85
TCF4-236ENST00000567880 EMC8O43402 210 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 IFNA16P05015 189 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 JMJD7P0C870 316 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 SLC35E2P0CK97 266 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 GGT1P19440 569 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 ETV5P41161 510 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 PRIM2P49643 509 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 DCDP81605 110 aaKnown RBP9.77□□□□□ -0.85
TCF4-236ENST00000567880 FADDQ13158 208 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 LASP1Q14847 261 aaKnown RBP9.77□□□□□ -0.85
TCF4-236ENST00000567880 TAF11Q15544 211 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 VMACQ2NL98 169 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.77□□□□□ -0.85
TCF4-236ENST00000567880 GCNT6Q5T4J0 391 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 CDCP2Q5VXM1 449 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 BHLHB9Q6PI77 547 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 CEACAM20Q6UY09 585 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 TMEM64Q6YI46 380 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 DGAT2L6Q6ZPD8 337 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 PTOV1Q86YD1 416 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 ZZZ3Q8IYH5 903 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 HORMAD2Q8N7B1 307 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 SIMC1Q8NDZ2 872 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 NUP43Q8NFH3 380 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 OR56A1Q8NGH5 318 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 OR5D16Q8NGK9 328 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 SFXN5Q8TD22 340 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 JADE3Q92613 823 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 RAB8BQ92930 207 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 TSLPQ969D9 159 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 DGAT2Q96PD7 388 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 TRIM15Q9C019 465 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 CHST8Q9H2A9 424 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 MUC13Q9H3R2 512 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 MKKSQ9NPJ1 570 aaPredicted RBP9.77□□□□□ -0.85
TCF4-236ENST00000567880 PAPOLBQ9NRJ5 636 aaKnown RBP9.77□□□□□ -0.85
TCF4-236ENST00000567880 SLC22A11Q9NSA0 550 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 PISDQ9UG56 409 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 MAGEL2Q9UJ55 1249 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 MKL2Q9ULH7 1088 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 B3GALT1Q9Y5Z6 326 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 GMEB1Q9Y692 573 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 V9GYQ6 96 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 PTPRBP23467 1997 aa9.77□□□□□ -0.85
TCF4-236ENST00000567880 PROB1E7EW31 1015 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 TMX2-CTNND1H3BSU7 103 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 MEN1O00255 615 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 CXCR6O00574 342 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 F12P00748 615 aaPredicted RBP9.76□□□□□ -0.85
TCF4-236ENST00000567880 HMGN2P05204 90 aaKnown RBP9.76□□□□□ -0.85
TCF4-236ENST00000567880 CT62P0C5K7 136 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 MATN1P21941 496 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 DSTNP60981 165 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 OCA2Q04671 838 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 EXOSC7Q15024 291 aaKnown RBP9.76□□□□□ -0.85
TCF4-236ENST00000567880 ADRM1Q16186 407 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 PRICKLE4Q2TBC4 344 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 ZNF628Q5EBL2 1059 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 CPZQ66K79 652 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 LCN8Q6JVE9 175 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 WDR53Q7Z5U6 358 aaPredicted RBP9.76□□□□□ -0.85
TCF4-236ENST00000567880 GLRX5Q86SX6 157 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 LAPTM4BQ86VI4 370 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 PROSER1Q86XN7 944 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 SLC44A2Q8IWA5 706 aaPredicted RBP9.76□□□□□ -0.85
TCF4-236ENST00000567880 ST13P4Q8IZP2 240 aaPredicted RBP9.76□□□□□ -0.85
TCF4-236ENST00000567880 DRAXINQ8NBI3 349 aaPredicted RBP9.76□□□□□ -0.85
TCF4-236ENST00000567880 FAM162AQ96A26 154 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 MOAP1Q96BY2 351 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 NSMCE2Q96MF7 247 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 SMAD5Q99717 465 aaKnown RBP9.76□□□□□ -0.85
TCF4-236ENST00000567880 YIPF3Q9GZM5 350 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 OR51I1Q9H343 314 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 SERHL2Q9H4I8 314 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 ADAP2Q9NPF8 381 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 MAT2BQ9NZL9 334 aa9.76□□□□□ -0.85
TCF4-236ENST00000567880 IFT80Q9P2H3 777 aaPredicted RBP9.76□□□□□ -0.85
TCF4-236ENST00000567880 CLDN16Q9Y5I7 305 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms