RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 ANKRA2Q9H9E1 313 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 SH2D2AQ9NP31 389 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 ACSS1Q9NUB1 689 aaPredicted RBP11.48□□□□□ -0.57
RNF40-211ENST00000567365 GIMAP4Q9NUV9 329 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 ANKRD10Q9NXR5 420 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 NOP53Q9NZM5 478 aaKnown RBP11.48□□□□□ -0.57
RNF40-211ENST00000567365 NTMQ9P121 344 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 LRFN1Q9P244 771 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 ABI3Q9P2A4 366 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 ENTPD4Q9Y227 616 aa11.48□□□□□ -0.57
RNF40-211ENST00000567365 NUP214P35658 2090 aaPredicted RBP11.47□□□□□ -0.57
RNF40-211ENST00000567365 EML6Q6ZMW3 1958 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 TRPC5OSA6NMA1 111 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 FCHO1O14526 889 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 OR6B1O95007 311 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 LAMP1P11279 417 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 LBPP18428 481 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 PRPS1L1P21108 318 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 EPHA3P29320 983 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 SOX3P41225 446 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 CYB561P49447 251 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 SSR4P51571 173 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 TLE1Q04724 770 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 MLC1Q15049 377 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 INPP5JQ15735 1006 aaPredicted RBP11.47□□□□□ -0.57
RNF40-211ENST00000567365 ZNF791Q3KP31 576 aaPredicted RBP11.47□□□□□ -0.57
RNF40-211ENST00000567365 SLC9B1Q4ZJI4 515 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 ZNF324BQ6AW86 544 aaPredicted RBP11.47□□□□□ -0.57
RNF40-211ENST00000567365 SLC29A4Q7RTT9 530 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 R3HCC1LQ7Z5L2 792 aaKnown RBP11.47□□□□□ -0.57
RNF40-211ENST00000567365 GPALPP1Q8IXQ4 340 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 FAM9CQ8IZT9 166 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 SLC15A4Q8N697 577 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 OR7A2PQ8NGA2 310 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 PSMA8Q8TAA3 256 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 ACTRT2Q8TDY3 377 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 HOXB13Q92826 284 aaPredicted RBP11.47□□□□□ -0.57
RNF40-211ENST00000567365 KAT2AQ92830 837 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 CIDECQ96AQ7 238 aaPredicted RBP11.47□□□□□ -0.57
RNF40-211ENST00000567365 MIB2Q96AX9 1013 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 PPCDCQ96CD2 204 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 NTNG2Q96CW9 530 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 SNRNP40Q96DI7 357 aaKnown RBP11.47□□□□□ -0.57
RNF40-211ENST00000567365 VSTM2LQ96N03 204 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 OR52B2Q96RD2 323 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 MED4Q9NPJ6 270 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 C19orf53Q9UNZ5 99 aaPredicted RBP11.47□□□□□ -0.57
RNF40-211ENST00000567365 EIF3LQ9Y262 564 aaKnown RBP11.47□□□□□ -0.57
RNF40-211ENST00000567365 GPR45Q9Y5Y3 372 aa11.47□□□□□ -0.57
RNF40-211ENST00000567365 C2orf92A0A1B0GVN3 265 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 ASPDHA6ND91 283 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 PDPK1O15530 556 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 NME2P1O60361 137 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 SCN2BO60939 215 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 NME6O75414 186 aaPredicted RBP11.46□□□□□ -0.57
RNF40-211ENST00000567365 SP1P08047 785 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 FBXO45P0C2W1 286 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 CT45A8P0DMV1 189 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 CT45A9P0DMV2 189 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 KITP10721 976 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 NME2P22392 152 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 HPCAL1P37235 193 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 RPL3P39023 403 aaKnown RBP11.46□□□□□ -0.57
RNF40-211ENST00000567365 MAP3K8P41279 467 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 MC3RP41968 323 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 NCBP2P52298 156 aaKnown RBP eCLIP11.46□□□□□ -0.57
RNF40-211ENST00000567365 WNT3P56703 355 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 FOXK1P85037 733 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 INAQ16352 499 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 CT45A2Q5DJT8 189 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 ZNF766Q5HY98 468 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 EXOSC6Q5RKV6 272 aaKnown RBP11.46□□□□□ -0.57
RNF40-211ENST00000567365 SLC25A25Q6KCM7 469 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 EPGNQ6UW88 154 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 ZNF551Q7Z340 670 aaPredicted RBP11.46□□□□□ -0.57
RNF40-211ENST00000567365 PRICKLE2Q7Z3G6 844 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 MDGA2Q7Z553 956 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 OR2L13Q8N349 312 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 CISD2Q8N5K1 135 aaKnown RBP11.46□□□□□ -0.57
RNF40-211ENST00000567365 TMEM156Q8N614 296 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 OR52R1Q8NGF1 315 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 STON2Q8WXE9 905 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 ELP4Q96EB1 424 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 BTBD9Q96Q07 612 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.46□□□□□ -0.57
RNF40-211ENST00000567365 NXF5Q9H1B4 397 aaKnown RBP11.46□□□□□ -0.57
RNF40-211ENST00000567365 SIRT3Q9NTG7 399 aaPredicted RBP11.46□□□□□ -0.57
RNF40-211ENST00000567365 ASF1BQ9NVP2 202 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 AIG1Q9NVV5 245 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 SH3BP4Q9P0V3 963 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 ERVK-11Q9UQG0 969 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 CFL2Q9Y281 166 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 GPR55Q9Y2T6 319 aaPredicted RBP11.46□□□□□ -0.57
RNF40-211ENST00000567365 HEMK1Q9Y5R4 338 aaPredicted RBP11.46□□□□□ -0.57
RNF40-211ENST00000567365 USH1CQ9Y6N9 552 aa11.46□□□□□ -0.57
RNF40-211ENST00000567365 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 GOLGA8QA0A0J9YX86 632 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 GOLGA8OA6NCC3 632 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 TTLL8A6PVC2 850 aa11.45□□□□□ -0.58
RNF40-211ENST00000567365 GOLGA8NF8WBI6 632 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms