RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 ELP4Q96EB1 424 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 GIMAP5Q96F15 307 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 ART5Q96L15 291 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 VSTM2LQ96N03 204 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 RILPQ96NA2 401 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 CCDC115Q96NT0 180 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 ELAC2Q9BQ52 826 aaKnown RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 ITPAQ9BY32 194 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 WWTR1Q9GZV5 400 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 EPN3Q9H201 632 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 ZNF552Q9H707 407 aaPredicted RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 ZBTB20Q9HC78 741 aaPredicted RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 NEUROD4Q9HD90 331 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 ATP13A2Q9NQ11 1180 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 SAR1AQ9NR31 198 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 SLC6A13Q9NSD5 602 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 FAM120CQ9NX05 1096 aaKnown RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 NTMQ9P121 344 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 COPS7AQ9UBW8 275 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 TRIM33Q9UPN9 1127 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 PCDHGA9Q9Y5G4 932 aaKnown RBP7.58□□□□□ -1.2
CDH13-208ENST00000566333 FREM3P0C091 2139 aa7.58□□□□□ -1.2
CDH13-208ENST00000566333 SHANK1Q9Y566 2161 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 A0A1W2PRB8 838 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 FAM234BA2RU67 622 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 A6NL46 340 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 NR5A2O00482 541 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 PRAMEF2O60811 474 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 NADKO95544 446 aaPredicted RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 FAM107AO95990 144 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 C1QCP02747 245 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 IL6P05231 212 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 ICAM2P13598 275 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 DDX5P17844 614 aaKnown RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 TNNI3P19429 210 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 NCF2P19878 526 aaPredicted RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 CCL11P51671 97 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 POLR2JP52435 117 aaKnown RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 RHDQ02161 417 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 RPS6KA2Q15349 733 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 BLOC1S3Q6QNY0 202 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 IGFL2Q6UWQ7 119 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 NPSR1Q6W5P4 371 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 DNAJC14Q6Y2X3 702 aaPredicted RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 TMEM64Q6YI46 380 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 HSDL2Q6YN16 418 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 C16orf47Q6ZP98 133 aaPredicted RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 MSANTD1Q6ZTZ1 278 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 LGI4Q8N135 537 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 NATD1Q8N6N6 113 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 EXD3Q8N9H8 876 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 OR7G1Q8NGA0 311 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 GOT1L1Q8NHS2 421 aaPredicted RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 NUBPLQ8TB37 319 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 SFXN5Q8TD22 340 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 OR5P2Q8WZ92 322 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 HOXB13Q92826 284 aaPredicted RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 ADIPOR1Q96A54 375 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 FAM120BQ96EK7 910 aaKnown RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 ZBTB18Q99592 522 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 PRPF18Q99633 342 aaKnown RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 SMAD5Q99717 465 aaKnown RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 INPP5KQ9BT40 448 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 MYLK2Q9H1R3 596 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 OR10A5Q9H207 317 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 SERHL2Q9H4I8 314 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 LIN28AQ9H9Z2 209 aaKnown RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 DDX18Q9NVP1 670 aaKnown RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 TMEM45AQ9NWC5 275 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 TAS2R9Q9NYW1 312 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 CCDC167Q9P0B6 97 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 ARMCX1Q9P291 453 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 PTGFRNQ9P2B2 879 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 BTNL2Q9UIR0 455 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 C19orf53Q9UNZ5 99 aaPredicted RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 HEMK1Q9Y5R4 338 aaPredicted RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 PCNX3Q9H6A9 2034 aa7.57□□□□□ -1.2
CDH13-208ENST00000566333 RP1L1Q8IWN7 2480 aaPredicted RBP7.57□□□□□ -1.2
CDH13-208ENST00000566333 ZNF462Q96JM2 2506 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 PRSS51A0A1B0GVH4 220 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 OR6C76A6NM76 312 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 ERVH48-1M5A8F1 160 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 FCHO1O14526 889 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 DYRK3O43781 588 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 S100A3P33764 101 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 GPC1P35052 558 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 MAP3K8P41279 467 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 CD97P48960 835 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 ST13P50502 369 aaKnown RBP7.56□□□□□ -1.2
CDH13-208ENST00000566333 MANFP55145 182 aaKnown RBP7.56□□□□□ -1.2
CDH13-208ENST00000566333 CORO7P57737 925 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 MLF1P58340 268 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 AP2B1P63010 937 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 KLF10Q13118 480 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 KCNAB2Q13303 367 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 MFAP5Q13361 173 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 TLR1Q15399 786 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 NNATQ16517 81 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 GTDC1Q4AE62 458 aa7.56□□□□□ -1.2
CDH13-208ENST00000566333 AGKQ53H12 422 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms