RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 LRATO95237 230 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 ASMTP46597 345 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 TDGF1P3P51864 188 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 PMP22Q01453 160 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 SRSF1Q07955 248 aaKnown RBP eCLIP12.79□□□□□ -0.364e-9■■■■■ 33.3
HERPUD1-210ENST00000565966 IL23RQ5VWK5 629 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 MDGA2Q7Z553 956 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 VWA5B2Q8N398 1253 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 LIX1Q8N485 282 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 ZNF615Q8N8J6 731 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 ADCY4Q8NFM4 1077 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 OR7G1Q8NGA0 311 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 SLC22A8Q8TCC7 542 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 GFM2Q969S9 779 aaKnown RBP12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 CTHRC1Q96CG8 243 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 SGCZQ96LD1 299 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 BRINP2Q9C0B6 783 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 OR10A5Q9H207 317 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 AKTIPQ9H8T0 292 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 MEAF6Q9HAF1 191 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 GIMAP4Q9NUV9 329 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 INTS9Q9NV88 658 aaKnown RBP12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 ZNF639Q9UID6 485 aa12.79□□□□□ -0.36
HERPUD1-210ENST00000565966 C2orf92A0A1B0GVN3 265 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 ZNF354AO60765 605 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 TBX19O60806 448 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 KITP10721 976 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 PRPS2P11908 318 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 PCSK2P16519 638 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 MST1P26927 711 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 ALDH6A1Q02252 535 aaKnown RBP12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 EMX2Q04743 252 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 DUSP8Q13202 625 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 MAD2L1Q13257 205 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 PDE7AQ13946 482 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 EBPQ15125 230 aaKnown RBP12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 SMU1Q2TAY7 513 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 TRMT12Q53H54 448 aaKnown RBP12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 ZNF385BQ569K4 471 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 ZNF628Q5EBL2 1059 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 HLA-DQA1Q5Y7H0 255 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 ANKRD26P1Q6NSI1 321 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 SULF2Q8IWU5 870 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 FAM9CQ8IZT9 166 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 GOLM1Q8NBJ4 401 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 POGLUT1Q8NBL1 392 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 PSD4Q8NDX1 1056 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 ZNF675Q8TD23 568 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 TP53INP1Q96A56 240 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 ZNF764Q96H86 408 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 FRMD6Q96NE9 622 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 BBS4Q96RK4 519 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 GAL3ST4Q96RP7 486 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 WWTR1Q9GZV5 400 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 REEP4Q9H6H4 257 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 ASIC5Q9NY37 505 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 MARCOQ9UEW3 520 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 CFL2Q9Y281 166 aa12.78□□□□□ -0.36
HERPUD1-210ENST00000565966 USP9XQ93008 2570 aaPredicted RBP12.77□□□□□ -0.36
HERPUD1-210ENST00000565966 LRRK2Q5S007 2527 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 SLCO1B7G3V0H7 640 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 SDHDO14521 159 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 HDAC3O15379 428 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 PEX1O43933 1283 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 NADKO95544 446 aaPredicted RBP12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 CBX7O95931 251 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 MPIP34949 423 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 MEOX1P50221 254 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 MRPS35P82673 323 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 SRSF11Q05519 484 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 PTGR1Q14914 329 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 EXOSC7Q15024 291 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 KRTCAP3Q53RY4 240 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 GFRALQ6UXV0 394 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 RTL4Q6ZR62 310 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 WDR75Q8IWA0 830 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 DND1Q8IYX4 353 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 LRRC34Q8IZ02 419 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 TAGAPQ8N103 731 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 CPSF7Q8N684 471 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 ZNF441Q8N8Z8 693 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 SIMC1Q8NDZ2 872 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 OR9A2Q8NGT5 310 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 LRRC8CQ8TDW0 803 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 DYDC1Q8WWB3 177 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 CKAP2Q8WWK9 683 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 KAT2AQ92830 837 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 PPCDCQ96CD2 204 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 MTERF3Q96E29 417 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 C7orf26Q96N11 449 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 GLIPR2Q9H4G4 154 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 NOP53Q9NZM5 478 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 SEC14L3Q9UDX4 400 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 ATP6V1HQ9UI12 483 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 EIF3LQ9Y262 564 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 PCNX1Q96RV3 2341 aa12.77□□□□□ -0.37
HERPUD1-210ENST00000565966 ICE1Q9Y2F5 2266 aa12.76□□□□□ -0.37
HERPUD1-210ENST00000565966 TRPC5OSA6NMA1 111 aa12.76□□□□□ -0.37
HERPUD1-210ENST00000565966 BCAS2O75934 225 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms