RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 DRD2P14416 443 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 ENDOUP21128 410 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 DRD5P21918 477 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 ABCD3P28288 659 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 TIMP3P35625 211 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 CASP3P42574 277 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 KRT6CP48668 564 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 CDK9P50750 372 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 FBXW4P57775 412 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 KRTAP10-9P60411 292 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 CLCQ05315 142 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 DUSP8Q13202 625 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 TESK1Q15569 626 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 PRICKLE4Q2TBC4 344 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 SLC30A6Q6NXT4 461 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 COMMD6Q7Z4G1 85 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 ULK2Q8IYT8 1036 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 VWA5B2Q8N398 1253 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 DOK4Q8TEW6 326 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 UCN3Q969E3 161 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 CTHRC1Q96CG8 243 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 TMEM41AQ96HV5 264 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 C16orf45Q96MC5 204 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 NSUN5Q96P11 429 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 TIMP4Q99727 224 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 SHCBP1LQ9BZQ2 653 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 UBQLN3Q9H347 655 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 SPRR3Q9UBC9 169 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF629Q9UEG4 869 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF639Q9UID6 485 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 FOXD3Q9UJU5 478 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF780BQ9Y6R6 833 aa11.17□□□□□ -0.62
GTF3C1-204ENST00000564664 A8MT66 165 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 KIF2AO00139 706 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 DVL2O14641 736 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 ULK1O75385 1050 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 PPM1BO75688 479 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 TRAPPC6AO75865 159 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 CT62P0C5K7 136 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 RHOXF2BP0C7M4 288 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 IMPDH1P20839 514 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 GPX3P22352 226 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 ECHS1P30084 290 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 CEACAM8P31997 349 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 GCKP35557 465 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 ADH7P40394 386 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 PPICP45877 212 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 GSTM5P46439 218 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 MASP1P48740 699 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 MGAT2Q10469 447 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 GALNT1Q10472 559 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 CSTF3Q12996 717 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 RASA2Q15283 850 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 SGO1Q5FBB7 561 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 TIGD3Q6B0B8 471 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 VASNQ6EMK4 673 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 LETMD1Q6P1Q0 360 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 ARSKQ6UWY0 536 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 TRMT10CQ7L0Y3 403 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 LACC1Q8IV20 430 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 SLC22A9Q8IVM8 553 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 GBP7Q8N8V2 638 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 LCORQ96JN0 433 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 RILPQ96NA2 401 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF382Q96SR6 550 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 PRDM14Q9GZV8 571 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 CALHM2Q9HA72 323 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 MCM8Q9UJA3 840 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 ITGB1BP2Q9UKP3 347 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 EDARQ9UNE0 448 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 C15orf41Q9Y2V0 281 aa11.16□□□□□ -0.62
GTF3C1-204ENST00000564664 C15orf38-AP3S2A0A0A6YYH1 394 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 EXOC1LA0A1B0GW35 172 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 TO15178 435 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 ERAL1O75616 437 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 ACTL6AO96019 429 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 IL2RAP01589 272 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 GSTA1P08263 222 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 SBK3P0C264 359 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 CD1EP15812 388 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 CDH13P55290 713 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 NAA20P61599 178 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 CRYZQ08257 329 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 MYBPHQ13203 477 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 FBXL19-AS1Q494R0 122 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF678Q5SXM1 525 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 UBAP2Q5T6F2 1119 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 LIX1LQ8IVB5 337 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 IFT20Q8IY31 132 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 NOA1Q8NC60 698 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 OR1J4Q8NGS1 313 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF675Q8TD23 568 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 ACMSDQ8TDX5 336 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 KLHL29Q96CT2 875 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 ZNF681Q96N22 645 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 GNRHR2Q96P88 292 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 BRINP2Q9C0B6 783 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 SLC6A15Q9H2J7 730 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 METTL7AQ9H8H3 244 aa11.15□□□□□ -0.62
GTF3C1-204ENST00000564664 FARSBQ9NSD9 589 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms