RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SNU13P55769 128 aaKnown RBP3.22□□□□□ -1.89
UBR1-205ENST00000564540 ZNF530Q6P9A1 599 aaPredicted RBP3.22□□□□□ -1.89
UBR1-205ENST00000564540 MFSD7Q6UXD7 560 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 SIDT2Q8NBJ9 832 aaKnown RBP3.22□□□□□ -1.89
UBR1-205ENST00000564540 FIBINQ8TAL6 211 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 ADPGKQ9BRR6 497 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 GPR174Q9BXC1 333 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 GANQ9H2C0 597 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 DCLRE1BQ9H816 532 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 MAGEF1Q9HAY2 307 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 NRN1Q9NPD7 142 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 ESM1Q9NQ30 184 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 MIEF1Q9NQG6 463 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 ABCB8Q9NUT2 735 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 TMEM9Q9P0T7 183 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 RNF115Q9Y4L5 304 aa3.22□□□□□ -1.89
UBR1-205ENST00000564540 CYB561D2O14569 222 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 ALPIP09923 528 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 VCLP18206 1134 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 PTMSP20962 102 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 PTPN4P29074 926 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 VCPP55072 806 aaKnown RBP3.21□□□□□ -1.9
UBR1-205ENST00000564540 HAND2P61296 217 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 HERV-K104P63124 156 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 CDKL1Q00532 357 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 CKAP4Q07065 602 aaKnown RBP3.21□□□□□ -1.9
UBR1-205ENST00000564540 CD47Q08722 323 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 SERTAD2Q14140 314 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 CD226Q15762 336 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 HAGHQ16775 308 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 FAM133BQ5BKY9 247 aaKnown RBP3.21□□□□□ -1.9
UBR1-205ENST00000564540 SLC22A10Q63ZE4 541 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 CDC42EP5Q6NZY7 148 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 IGFL2Q6UWQ7 119 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 STOX1Q6ZVD7 989 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 KCTD9Q7L273 389 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 PIWIL3Q7Z3Z3 882 aaKnown RBP3.21□□□□□ -1.9
UBR1-205ENST00000564540 OR2L5Q8NG80 312 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 RDH11Q8TC12 318 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 FRAT1Q92837 279 aaPredicted RBP3.21□□□□□ -1.9
UBR1-205ENST00000564540 ISG20L2Q9H9L3 353 aaKnown RBP3.21□□□□□ -1.9
UBR1-205ENST00000564540 COPS7BQ9H9Q2 264 aaPredicted RBP3.21□□□□□ -1.9
UBR1-205ENST00000564540 CENPMQ9NSP4 180 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 PNPLA3Q9NST1 481 aa3.21□□□□□ -1.9
UBR1-205ENST00000564540 NOL7Q9UMY1 257 aaKnown RBP3.21□□□□□ -1.9
UBR1-205ENST00000564540 G3V3Y1 287 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 STAM2O75886 525 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 SLC2A10O95528 541 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 APBB3O95704 486 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 GLULP15104 373 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 CPN1P15169 458 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 ACP1P24666 158 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 SAA4P35542 130 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 XCR1P46094 333 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 SMSP52788 366 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 ZNF85Q03923 595 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 EXOSC7Q15024 291 aaKnown RBP3.2□□□□□ -1.9
UBR1-205ENST00000564540 HKDC1Q2TB90 917 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 WSCD1Q658N2 575 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 GPR65Q8IYL9 337 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 SLCO4A1Q96BD0 722 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 RPGRIP1Q96KN7 1286 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 C9orf85Q96MD7 179 aa3.2□□□□□ -1.9
UBR1-205ENST00000564540 ALDH8A1Q9H2A2 487 aaPredicted RBP3.2□□□□□ -1.9
UBR1-205ENST00000564540 MTF2Q9Y483 593 aaPredicted RBP3.2□□□□□ -1.9
UBR1-205ENST00000564540 A0A0U1RQK1 487 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 ZNF320A2RRD8 509 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 SMIM30A4D0T7 59 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 H0Y626 953 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 NUDT21O43809 227 aaKnown RBP3.19□□□□□ -1.9
UBR1-205ENST00000564540 TYROBPO43914 113 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 PDE5AO76074 875 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 CT45A10P0DMU9 189 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 UROSP10746 265 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 VDRP11473 427 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 OR1D4P47884 311 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 P2RY4P51582 365 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 ZNF131P52739 623 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 OVGP1Q12889 678 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 KRT31Q15323 416 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 IFI44LQ53G44 452 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 ZNF658Q5TYW1 1059 aaPredicted RBP3.19□□□□□ -1.9
UBR1-205ENST00000564540 ASRGL1Q7L266 308 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 ANKRD23Q86SG2 305 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 NAT8LQ8N9F0 302 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 OR4A16Q8NH70 328 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 CCDC26Q8TAB7 109 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 RFESDQ8TAC1 157 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 FAM122AQ96E09 287 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 TECTBQ96PL2 329 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 CPXM1Q96SM3 734 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 KIR2DL4Q99706 377 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 RSPH9Q9H1X1 276 aaPredicted RBP3.19□□□□□ -1.9
UBR1-205ENST00000564540 ZWILCHQ9H900 591 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 RPS6KB2Q9UBS0 482 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 LIPT1Q9Y234 373 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 CA5BQ9Y2D0 317 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 SLC9A8Q9Y2E8 581 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 NTNG1Q9Y2I2 539 aa3.19□□□□□ -1.9
UBR1-205ENST00000564540 COL4A4P53420 1690 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms