RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 EID3Q8N140 333 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 RPRMLQ8N4K4 120 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 RDH11Q8TC12 318 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 C16orf78Q8WTQ4 265 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 EXOSC8Q96B26 276 aaKnown RBP18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 JSRP1Q96MG2 331 aaPredicted RBP18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 SMC6Q96SB8 1091 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 DOHHQ9BU89 302 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 ITPAQ9BY32 194 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 NXF5Q9H1B4 397 aaKnown RBP18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 OXSMQ9NWU1 459 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 CNIH4Q9P003 139 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 ZNF639Q9UID6 485 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 BOKQ9UMX3 212 aaPredicted RBP18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 NPFFR2Q9Y5X5 522 aa18.36■□□□□ 0.53
SHCBP1-203ENST00000564272 TLDC2A0PJX2 215 aa18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 CLDN14O95500 239 aa18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 PRF1P14222 555 aa18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 NRG3P56975 720 aa18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 MRPS35P82673 323 aaKnown RBP18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 SLC18A2Q05940 514 aa18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 TRMT12Q53H54 448 aaKnown RBP18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 OR52R1Q8NGF1 315 aa18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 OR5M9Q8NGP3 310 aa18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 DIO2Q92813 273 aa18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 C11orf24Q96F05 449 aaPredicted RBP18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 TP63Q9H3D4 680 aaPredicted RBP18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 ZFP64Q9NPA5 681 aa18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 PNPLA3Q9NST1 481 aa18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 RYDENQ9NUL5 291 aaKnown RBP18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 PLLPQ9Y342 182 aa18.35■□□□□ 0.53
SHCBP1-203ENST00000564272 NINQ8N4C6 2090 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 A0A1B0GVC2 190 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 SERTM1A2A2V5 107 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 C19orf84I3L1E1 186 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 TP53I11O14683 189 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 CRCPO75575 148 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 SNRPB2P08579 225 aaKnown RBP18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 DRD2P14416 443 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 NAA20P61599 178 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 IMPG1Q17R60 797 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 SPDYAQ5MJ70 313 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 LIPMQ5VYY2 423 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 GALNT18Q6P9A2 607 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 C10orf107Q8IVU9 208 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 C17orf47Q8NEP4 570 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 CDC26Q8NHZ8 85 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 SPPL2AQ8TCT8 520 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 SDCCAG3Q96C92 435 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 CTHRC1Q96CG8 243 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 LDAHQ9H6V9 325 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 ANKRA2Q9H9E1 313 aa18.34■□□□□ 0.53
SHCBP1-203ENST00000564272 CAPN14A8MX76 684 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 ANXA4P09525 319 aaPredicted RBP18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 NUDT17P0C025 328 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 ENDOUP21128 410 aaKnown RBP18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 ABCD3P28288 659 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 MAN2A2P49641 1150 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 TMED10P49755 219 aaKnown RBP18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 SLC10A1Q14973 349 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 PCLAFQ15004 111 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 GXYLT1Q4G148 440 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 ZNF628Q5EBL2 1059 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 CCDC116Q8IYX3 515 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 OR9A2Q8NGT5 310 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 KAT2AQ92830 837 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 APOPT1Q96IL0 206 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 ZNF597Q96LX8 424 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 RILPQ96NA2 401 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 SLC6A15Q9H2J7 730 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 EXO5Q9H790 373 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 CHST11Q9NPF2 352 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 CFL2Q9Y281 166 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 POLR3HQ9Y535 204 aaPredicted RBP18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 PTGDR2Q9Y5Y4 395 aa18.33■□□□□ 0.52
SHCBP1-203ENST00000564272 TRGV5A0A0B4J1U4 118 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 OR14I1A6ND48 311 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 H3BQF6 201 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 AQP7O14520 342 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 BCKDKO14874 412 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 TRIM3O75382 744 aaPredicted RBP18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 NME6O75414 186 aaPredicted RBP18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 EMDP50402 254 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 ZNF763Q0D2J5 394 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 HEPACAMQ14CZ8 416 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 PRSS53Q2L4Q9 553 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 TBCELQ5QJ74 424 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 CLEC6AQ6EIG7 209 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 DESI1Q6ICB0 168 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 ZNF585AQ6P3V2 769 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 ZNF675Q8TD23 568 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 AENQ8WTP8 325 aaKnown RBP18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 SIRT5Q9NXA8 310 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 MKS1Q9NXB0 559 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 SPRR3Q9UBC9 169 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 MID2Q9UJV3 735 aa18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 V9GYY5 206 aaPredicted RBP18.32■□□□□ 0.52
SHCBP1-203ENST00000564272 ANKRD33BA6NCL7 494 aa18.31■□□□□ 0.52
SHCBP1-203ENST00000564272 SUSD5O60279 629 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms