RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 GRHPRQ9UBQ7 328 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 ADAM29Q9UKF5 820 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 NAALAD2Q9Y3Q0 740 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 SNX13Q9Y5W8 968 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 IGF2RP11717 2491 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 HEATR5BQ9P2D3 2071 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 IGLV3-12A0A075B6K2 115 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 GOLGA8QA0A0J9YX86 632 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 LOC101059948A0A1B0GTJ6 334 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 GOLGA8OA6NCC3 632 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 VSTM2BA6NLU5 285 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 TRPC5OSA6NMA1 111 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 SRRM3A6NNA2 597 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 GOLGA8NF8WBI6 632 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 H0YIG0 161 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 CHST10O43529 356 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 TLX3O43711 291 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 PCDH7O60245 1069 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 RAD1O60671 282 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 JRKO75564 520 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 KLK1P06870 262 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ALDOCP09972 364 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 C1QTNF9P0C862 333 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 BCKDHAP12694 445 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 SDC1P18827 310 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 FBLP22087 321 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 CD82P27701 267 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 RBMS1P29558 406 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 TIA1P31483 386 aaKnown RBP eCLIP4.88□□□□□ -1.637e-7■■□□□ 14.1
HERPUD1-207ENST00000563781 RAD52P43351 418 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 RAP1GDS1P52306 607 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 HNRNPFP52597 415 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 AQP5P55064 265 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 DIO3P55073 304 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 MTTPP55157 894 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 LIM2P55344 173 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 HNRNPH2P55795 449 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 FOXL2P58012 376 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 RPL38P63173 70 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 NKX6-1P78426 367 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 DCDP81605 110 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 TGM3Q08188 693 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ACSM2AQ08AH3 577 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 SF3A3Q12874 501 aaKnown RBP eCLIP4.88□□□□□ -1.639e-9■■□□□ 11.8
HERPUD1-207ENST00000563781 SLAMF1Q13291 335 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ADRM1Q16186 407 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 SMU1Q2TAY7 513 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 AP5B1Q2VPB7 878 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 TBC1D25Q3MII6 688 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 RFTN2Q52LD8 501 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 SPIN4Q56A73 249 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 EMC4Q5J8M3 183 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 SPDYAQ5MJ70 313 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ARHGAP40Q5TG30 622 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 STEAP3Q658P3 488 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 TMEM198Q66K66 360 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 CPZQ66K79 652 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ACSM2BQ68CK6 577 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 NOXRED1Q6NXP6 359 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 FAM199XQ6PEV8 388 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 CLNKQ7Z7G1 428 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 NUDT13Q86X67 352 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 MMP21Q8N119 569 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 SRFBP1Q8NEF9 429 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ACTRT2Q8TDY3 377 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 C16orf78Q8WTQ4 265 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 CT55Q8WUE5 264 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 C10orf82Q8WW14 230 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 UCN3Q969E3 161 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 FKBP10Q96AY3 582 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 TUBGCP3Q96CW5 907 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 MMABQ96EY8 250 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 METTL2AQ96IZ6 378 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 PPP3R2Q96LZ3 170 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 CSF3RQ99062 836 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 MYCBPQ99417 103 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 MAPKAP1Q9BPZ7 522 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 EBF4Q9BQW3 602 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 CENPKQ9BS16 269 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 CCDC28BQ9BUN5 200 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 C1orf50Q9BV19 199 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 NPLQ9BXD5 320 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 EBPLQ9BY08 206 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ROGDIQ9GZN7 287 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 CHST8Q9H2A9 424 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ZMAT3Q9HA38 289 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 CLK4Q9HAZ1 481 aaKnown RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ANKHQ9HCJ1 492 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ZNF304Q9HCX3 659 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 LYRM4Q9HD34 91 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 THSD1Q9NS62 852 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 LANCL2Q9NS86 450 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 RIC8BQ9NVN3 520 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 AIG1Q9NVV5 245 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 NMRK1Q9NWW6 199 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 TEX10Q9NXF1 929 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ASIC5Q9NY37 505 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 CTSFQ9UBX1 484 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 SCOCQ9UIL1 159 aa4.88□□□□□ -1.63
HERPUD1-207ENST00000563781 ADAM21Q9UKJ8 722 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms