RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-206	ENST00000562791	RILP	Q96NA2	401 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	CASD1	Q96PB1	797 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	QKI	Q96PU8	341 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	DOK1	Q99704	481 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	KXD1	Q9BQD3	176 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	TCEAL7	Q9BRU2	100 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	TMEM175	Q9BSA9	504 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	C2orf88	Q9BSF0	95 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	TBC1D10A	Q9BXI6	508 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	SMYD3	Q9H7B4	428 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	GDF3	Q9NR23	364 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	ACOXL	Q9NUZ1	547 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	TMEM160	Q9NX00	188 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	MPP6	Q9NZW5	540 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	EPHA6	Q9UF33	1036 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	BCAP29	Q9UHQ4	241 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	NOCT	Q9UK39	431 aa	Known RBP	4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	ITGA11	Q9UKX5	1188 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	PIN4	Q9Y237	131 aa	Known RBP	4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	DHRS7	Q9Y394	339 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	SAR1B	Q9Y6B6	198 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	RNF215	Q9Y6U7	377 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	TAF1L	Q8IZX4	1826 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	TRPM1	Q7Z4N2	1603 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	NID2	Q14112	1375 aa		4.27	□□□□□ -1.73
CHD9-206	ENST00000562791	EFCAB5	A4FU69	1503 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	ASTN2	O75129	1339 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD9-206	ENST00000562791		A0A1W2PN81	502 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	GNG14	A0A1W2PPG7	69 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	ISPD	A4D126	451 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	TRABD2B	A6NFA1	517 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	MFSD2B	A6NFX1	497 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	EFCAB7	A8K855	629 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791		I3L4J1	428 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	CTDSP2	O14595	271 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	MEIS2	O14770	477 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	ZBTB5	O15062	677 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	VEGFD	O43915	354 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	SNAP91	O60641	907 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	UGT1A9	O60656	530 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	CYTIP	O60759	359 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	TBX10	O75333	385 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	SPAG6	O75602	509 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	PDE9A	O76083	593 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	GOT2	P00505	430 aa	Known RBP	4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	EPO	P01588	193 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	CRH	P06850	196 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	IGFBP1	P08833	259 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	CLTB	P09497	229 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	SBK2	P0C263	348 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	LINC00614	P0C842	121 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	MBL2	P11226	248 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	CETP	P11597	493 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	FGF5	P12034	268 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	UGT1A6	P19224	532 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	TNNI3	P19429	210 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	UGT1A1	P22309	533 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	UGT1A4	P22310	534 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	ANOS1	P23352	680 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	AHCY	P23526	432 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	CMA1	P23946	247 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	PIK3R1	P27986	724 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	LAP3	P28838	519 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	UGT1A3	P35503	534 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	UGT1A5	P35504	534 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	CHRNA7	P36544	502 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	BTD	P43251	543 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	VEGFC	P49767	419 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	SERPINH1	P50454	418 aa	Known RBP	4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	ACTR3	P61158	418 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	COPZ1	P61923	177 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	EFNB1	P98172	346 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	TLE2	Q04725	743 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	DGCR6	Q14129	220 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	FAM83E	Q2M2I3	478 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	CHRFAM7A	Q494W8	412 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	GPAT3	Q53EU6	434 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	C10orf120	Q5SQS8	335 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	LDLRAP1	Q5SW96	308 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	UBE2U	Q5VVX9	321 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	ZNF772	Q68DY9	489 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	ADAM5	Q6NVV9	412 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	CDC73	Q6P1J9	531 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	NOTUM	Q6P988	496 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	BRAT1	Q6PJG6	821 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	GFRAL	Q6UXV0	394 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	ARPIN	Q7Z6K5	226 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	DPPA2	Q7Z7J5	298 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	AACS	Q86V21	672 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	GPR180	Q86V85	440 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	ARMC8	Q8IUR7	673 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	CENPL	Q8N0S6	344 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	FBXW8	Q8N3Y1	598 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	ANKRD52	Q8NB46	1076 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	OR2AK2	Q8NG84	335 aa		4.26	□□□□□ -1.73
CHD9-206	ENST00000562791	OR2L3	Q8NG85	312 aa		4.26	□□□□□ -1.73

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