RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CIDECQ96AQ7 238 aaPredicted RBP12.43□□□□□ -0.42
CDH1-204ENST00000562118 ELP4Q96EB1 424 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 ZBED6CLQ96FA7 236 aaPredicted RBP12.43□□□□□ -0.42
CDH1-204ENST00000562118 SCMH1Q96GD3 660 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 TEX37Q96LM6 180 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 VSTM2LQ96N03 204 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 RASL10BQ96S79 203 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 EBF4Q9BQW3 602 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 CNPPD1Q9BV87 410 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 ZNF385DQ9H6B1 395 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 STMN3Q9NZ72 180 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 C19orf53Q9UNZ5 99 aaPredicted RBP12.43□□□□□ -0.42
CDH1-204ENST00000562118 DTX4Q9Y2E6 619 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 UBR5O95071 2799 aaPredicted RBP12.43□□□□□ -0.42
CDH1-204ENST00000562118 NUP214P35658 2090 aaPredicted RBP12.42□□□□□ -0.42
CDH1-204ENST00000562118 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 GOLGA8QA0A0J9YX86 632 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 GOLGA8OA6NCC3 632 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 GOLGA8NF8WBI6 632 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 UPK1AO00322 258 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 RNASET2O00584 256 aaKnown RBP12.42□□□□□ -0.42
CDH1-204ENST00000562118 FCHO1O14526 889 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 AKAP10O43572 662 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 PRAMEF2O60811 474 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 IL12AP29459 219 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 CD96P40200 585 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 CASRP41180 1078 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 HLCSP50747 726 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 NCBP2P52298 156 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDH1-204ENST00000562118 CLNS1AP54105 237 aaKnown RBP12.42□□□□□ -0.42
CDH1-204ENST00000562118 PSPHP78330 225 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 PHC1P78364 1004 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 MRPS35P82673 323 aaKnown RBP12.42□□□□□ -0.42
CDH1-204ENST00000562118 GUCY1A3Q02108 690 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 TLR1Q15399 786 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 INAQ16352 499 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 ZNF791Q3KP31 576 aaPredicted RBP12.42□□□□□ -0.42
CDH1-204ENST00000562118 NADK2Q4G0N4 442 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 CPTPQ5TA50 214 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 TMEM64Q6YI46 380 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 DND1Q8IYX4 353 aaKnown RBP12.42□□□□□ -0.42
CDH1-204ENST00000562118 ADCY4Q8NFM4 1077 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 NUDT8Q8WV74 236 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 RNF138Q8WVD3 245 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 GIMAP5Q96F15 307 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 BBS4Q96RK4 519 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 TCF7L2Q9NQB0 619 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 ATAD3AQ9NVI7 634 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 TMEM45AQ9NWC5 275 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 ZIM2Q9NZV7 527 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 MAP10Q9P2G4 905 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 ERVK-11Q9UQG0 969 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 CFL2Q9Y281 166 aa12.42□□□□□ -0.42
CDH1-204ENST00000562118 EML6Q6ZMW3 1958 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 TRAV17A0A0B4J275 112 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 DYTNA2CJ06 578 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 A8MUI8 341 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 B8ZZF3 427 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 E9PBE3 544 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 ACOX3O15254 700 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 OR2J2O76002 312 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 PRB1P04280 392 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 FBXO45P0C2W1 286 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 CT45A8P0DMV1 189 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 CT45A9P0DMV2 189 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 PTGER1P34995 402 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 MC3RP41968 323 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 ATP4BP51164 291 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 AQP5P55064 265 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 DCAF7P61962 342 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 SRSF11Q05519 484 aaKnown RBP12.41□□□□□ -0.42
CDH1-204ENST00000562118 ZNF169Q14929 603 aaPredicted RBP12.41□□□□□ -0.42
CDH1-204ENST00000562118 EXOSC7Q15024 291 aaKnown RBP12.41□□□□□ -0.42
CDH1-204ENST00000562118 PLEKHN1Q494U1 663 aaPredicted RBP12.41□□□□□ -0.42
CDH1-204ENST00000562118 CT45A2Q5DJT8 189 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 TMEM198Q66K66 360 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 C16orf47Q6ZP98 133 aaPredicted RBP12.41□□□□□ -0.42
CDH1-204ENST00000562118 SLC29A4Q7RTT9 530 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 ZNF551Q7Z340 670 aaPredicted RBP12.41□□□□□ -0.42
CDH1-204ENST00000562118 GOLM1Q8NBJ4 401 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 GLB1L3Q8NCI6 653 aaPredicted RBP12.41□□□□□ -0.42
CDH1-204ENST00000562118 OR52R1Q8NGF1 315 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 GOT1L1Q8NHS2 421 aaPredicted RBP12.41□□□□□ -0.42
CDH1-204ENST00000562118 ZFP28Q8NHY6 868 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 DOK4Q8TEW6 326 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 OR5P2Q8WZ92 322 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 KAT2AQ92830 837 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 SIGLEC12Q96PQ1 595 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 PRPF18Q99633 342 aaKnown RBP12.41□□□□□ -0.42
CDH1-204ENST00000562118 DUSP26Q9BV47 211 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 NEUROD4Q9HD90 331 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 PLA2G3Q9NZ20 509 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 SH3BP4Q9P0V3 963 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 ABI3Q9P2A4 366 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 PRODH2Q9UF12 536 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 GPR55Q9Y2T6 319 aaPredicted RBP12.41□□□□□ -0.42
CDH1-204ENST00000562118 HEMK1Q9Y5R4 338 aaPredicted RBP12.41□□□□□ -0.42
CDH1-204ENST00000562118 RELNP78509 3460 aa12.41□□□□□ -0.42
CDH1-204ENST00000562118 C2orf92A0A1B0GVN3 265 aa12.4□□□□□ -0.42
CDH1-204ENST00000562118 ASPDHA6ND91 283 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms