RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PIAS4Q8N2W9 510 aaPredicted RBP10.38□□□□□ -0.75
NEIL1-202ENST00000561643 CELF5Q8N6W0 485 aaKnown RBP10.38□□□□□ -0.75
NEIL1-202ENST00000561643 DEDD2Q8WXF8 326 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 ST8SIA2Q92186 375 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 TTC9Q92623 222 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 QRFPRQ96P65 431 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 SLC23A2Q9UGH3 650 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 GRIP1Q9Y3R0 1128 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 A0A0G2JN53 185 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 CKMT1AP12532 417 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 IL32P24001 234 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 IL12RB1P42701 662 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 XKP51811 444 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 EFR3AQ14156 821 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 ZMAT1Q5H9K5 638 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 FAM92BQ6ZTR7 304 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 NUDT13Q86X67 352 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 SLC34A3Q8N130 599 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 DNAJC5GQ8N7S2 189 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 ST13P5Q8NFI4 369 aaPredicted RBP10.38□□□□□ -0.75
NEIL1-202ENST00000561643 APOBEC4Q8WW27 367 aaKnown RBP10.38□□□□□ -0.75
NEIL1-202ENST00000561643 ZBED6CLQ96FA7 236 aaPredicted RBP10.38□□□□□ -0.75
NEIL1-202ENST00000561643 ZNF607Q96SK3 696 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 GON7Q9BXV9 100 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 POLR2J3Q9H1A7 115 aaKnown RBP10.38□□□□□ -0.75
NEIL1-202ENST00000561643 RHBGQ9H310 441 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 ZDHHC4Q9NPG8 344 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 TM7SF3Q9NS93 570 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 DEC1Q9P2X7 70 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 MGAT4BQ9UQ53 548 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 SLC27A6Q9Y2P4 619 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 INSL6Q9Y581 213 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 SNX11Q9Y5W9 270 aa10.38□□□□□ -0.75
NEIL1-202ENST00000561643 PNMA8CA0A1B0GUJ8 204 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 LEUTXA8MZ59 168 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 HMGN4O00479 90 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 FAAHO00519 579 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 SHOXO15266 292 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 OR1F1O43749 312 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 RPN2P04844 631 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 PCCBP05166 539 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 CLEC2LP0C7M8 214 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 GPC1P35052 558 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 CCT3P49368 545 aaKnown RBP10.37□□□□□ -0.75
NEIL1-202ENST00000561643 AP2S1P53680 142 aaPredicted RBP10.37□□□□□ -0.75
NEIL1-202ENST00000561643 ESCO2Q56NI9 601 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 ERN2Q76MJ5 926 aaKnown RBP10.37□□□□□ -0.75
NEIL1-202ENST00000561643 CACUL1Q86Y37 369 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 PELI2Q9HAT8 420 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 BRD7Q9NPI1 651 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 SLC35C2Q9NQQ7 365 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 TRPC4Q9UBN4 977 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 MKLN1Q9UL63 735 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 NOTCH4Q99466 2003 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 DSPPQ9NZW4 1301 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 RGS5O15539 181 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 B4GALT2O60909 372 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 TSC22D2O75157 780 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 SEMA7AO75326 666 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 HTRA4P83105 476 aaPredicted RBP10.37□□□□□ -0.75
NEIL1-202ENST00000561643 TAGLNQ01995 201 aaKnown RBP10.37□□□□□ -0.75
NEIL1-202ENST00000561643 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.37□□□□□ -0.75
NEIL1-202ENST00000561643 RPA4Q13156 261 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 ILKQ13418 452 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 MADCAM1Q13477 382 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 SSX1Q16384 188 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 BTBD16Q32M84 506 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 PAMR1Q6UXH9 720 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 ATCAYQ86WG3 371 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 CACTIN-AS1Q8N1I8 211 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 XAGE5Q8WWM1 108 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 KLHL6Q8WZ60 621 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 RSPRY1Q96DX4 576 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 ZNF354BQ96LW1 612 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 TEFMQ96QE5 360 aaKnown RBP10.37□□□□□ -0.75
NEIL1-202ENST00000561643 AIFM2Q9BRQ8 373 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 CNPPD1Q9BV87 410 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 MCCC2Q9HCC0 563 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 POLMQ9NP87 494 aaPredicted RBP10.37□□□□□ -0.75
NEIL1-202ENST00000561643 SIRT3Q9NTG7 399 aaPredicted RBP10.37□□□□□ -0.75
NEIL1-202ENST00000561643 TEX10Q9NXF1 929 aaPredicted RBP10.37□□□□□ -0.75
NEIL1-202ENST00000561643 REV1Q9UBZ9 1251 aa10.37□□□□□ -0.75
NEIL1-202ENST00000561643 LINC01387J3KSC0 135 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 NDUFS4O43181 175 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 ARHGEF9O43307 516 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 TMPRSS11DO60235 418 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 UGT2B17O75795 530 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 OR7A10O76100 309 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 CSF2P04141 144 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 OR12D1P0DN82 309 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 PIPP12273 146 aaPredicted RBP10.36□□□□□ -0.75
NEIL1-202ENST00000561643 TNNI3P19429 210 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 POU3F3P20264 500 aaPredicted RBP10.36□□□□□ -0.75
NEIL1-202ENST00000561643 SOX3P41225 446 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 LIMK1P53667 647 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 ZNF234Q14588 700 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 SYPL1Q16563 259 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 TOR1AIP1Q5JTV8 583 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 LRRTM4Q86VH4 590 aa10.36□□□□□ -0.75
NEIL1-202ENST00000561643 SFTPA1Q8IWL2 248 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms