RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 FAM180BQ6P0A1 224 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 ZCCHC12Q6PEW1 402 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 IGFL3Q6UXB1 125 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 RTL4Q6ZR62 310 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 ZNF605Q86T29 641 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 SLC44A2Q8IWA5 706 aaPredicted RBP9.95□□□□□ -0.82
TPM1-229ENST00000561242 MMP21Q8N119 569 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 KIF2BQ8N4N8 673 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 NFAM1Q8NET5 270 aaPredicted RBP9.95□□□□□ -0.82
TPM1-229ENST00000561242 ZNF675Q8TD23 568 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 GPR151Q8TDV0 419 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 DOK4Q8TEW6 326 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 ZNF721Q8TF20 911 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 PNPLA2Q96AD5 504 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 CNRIP1Q96F85 164 aaPredicted RBP9.95□□□□□ -0.82
TPM1-229ENST00000561242 ZNF764Q96H86 408 aaPredicted RBP9.95□□□□□ -0.82
TPM1-229ENST00000561242 AMDHD1Q96NU7 426 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 WWTR1Q9GZV5 400 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 RNF32Q9H0A6 362 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 GLIPR2Q9H4G4 154 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 RAD21L1Q9H4I0 556 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 METTL7AQ9H8H3 244 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 EQTNQ9NQ60 294 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 KLHL1Q9NR64 748 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 SACM1LQ9NTJ5 587 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 FGFR1OP2Q9NVK5 253 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 ANKRD10Q9NXR5 420 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 KLHL14Q9P2G3 628 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 B4GALT7Q9UBV7 327 aa9.95□□□□□ -0.82
TPM1-229ENST00000561242 CFAP54Q96N23 3096 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 FRYLO94915 3013 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 FAM234BA2RU67 622 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 EVPLLA8MZ36 301 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 FAM47E-STBD1D6RA91 191 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 PLOD2O00469 737 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 RNASET2O00584 256 aaKnown RBP9.94□□□□□ -0.82
TPM1-229ENST00000561242 RFXANKO14593 260 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 ANGPT2O15123 496 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 PLOD3O60568 738 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 ERN1O75460 977 aaKnown RBP9.94□□□□□ -0.82
TPM1-229ENST00000561242 DDAH2O95865 285 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 F10P00742 488 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 CELA2AP08217 269 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 DRD5P21918 477 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 MC3RP41968 323 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 PPICP45877 212 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 DIO3P55073 304 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 CASP6P55212 293 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 SLC37A1P57057 533 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 MRPS35P82673 323 aaKnown RBP9.94□□□□□ -0.82
TPM1-229ENST00000561242 Q0VFX4 171 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 FUT7Q11130 342 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 GNA13Q14344 377 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 EXOSC7Q15024 291 aaKnown RBP9.94□□□□□ -0.82
TPM1-229ENST00000561242 MLC1Q15049 377 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 TOMM20Q15388 145 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 FAM174BQ3ZCQ3 159 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 AGKQ53H12 422 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 TRMT12Q53H54 448 aaKnown RBP9.94□□□□□ -0.82
TPM1-229ENST00000561242 PIGGQ5H8A4 983 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 TBCELQ5QJ74 424 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 H3F3CQ6NXT2 135 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 FAM111BQ6SJ93 734 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 GK5Q6ZS86 529 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 ZNF551Q7Z340 670 aaPredicted RBP9.94□□□□□ -0.82
TPM1-229ENST00000561242 PACS2Q86VP3 889 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 KRTCAP2Q8N6L1 136 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 ANKS4BQ8N8V4 417 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 EXD3Q8N9H8 876 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 CDRT4Q8N9R6 151 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 APCDD1LQ8NCL9 501 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 OR5M3Q8NGP4 307 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 UCN3Q969E3 161 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 CIDECQ96AQ7 238 aaPredicted RBP9.94□□□□□ -0.82
TPM1-229ENST00000561242 TESCQ96BS2 214 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 ELP4Q96EB1 424 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 FCRL1Q96LA6 429 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 JSRP1Q96MG2 331 aaPredicted RBP9.94□□□□□ -0.82
TPM1-229ENST00000561242 G6PC3Q9BUM1 346 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 TMEM120AQ9BXJ8 343 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 SEMA4CQ9C0C4 833 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 EXO5Q9H790 373 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 TRIM45Q9H8W5 580 aaPredicted RBP9.94□□□□□ -0.82
TPM1-229ENST00000561242 ZBTB20Q9HC78 741 aaPredicted RBP9.94□□□□□ -0.82
TPM1-229ENST00000561242 AIG1Q9NVV5 245 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 MAT2BQ9NZL9 334 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 CNIH4Q9P003 139 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 CCDC167Q9P0B6 97 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 PPIEQ9UNP9 301 aaKnown RBP9.94□□□□□ -0.82
TPM1-229ENST00000561242 NPFFR2Q9Y5X5 522 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 SPTBN4Q9H254 2564 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 KIF26BQ2KJY2 2108 aa9.94□□□□□ -0.82
TPM1-229ENST00000561242 LAMA1P25391 3075 aa9.93□□□□□ -0.82
TPM1-229ENST00000561242 SDK2Q58EX2 2172 aa9.93□□□□□ -0.82
TPM1-229ENST00000561242 H3BNH8 94 aa9.93□□□□□ -0.82
TPM1-229ENST00000561242 SLC28A2O43868 658 aa9.93□□□□□ -0.82
TPM1-229ENST00000561242 SLC25A12O75746 678 aa9.93□□□□□ -0.82
TPM1-229ENST00000561242 C6orf47O95873 294 aa9.93□□□□□ -0.82
TPM1-229ENST00000561242 PGRP06401 933 aa9.93□□□□□ -0.82
TPM1-229ENST00000561242 LAMP1P11279 417 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms