RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 DND1Q8IYX4 353 aaKnown RBP11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 FAM9CQ8IZT9 166 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 OR10G3Q8NGC4 313 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 OR52N2Q8NGI0 321 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 OR9A2Q8NGT5 310 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 DIO2Q92813 273 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 GFM2Q969S9 779 aaKnown RBP11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 C11orf24Q96F05 449 aaPredicted RBP11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 ZNF681Q96N22 645 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 PSMG3-AS1Q96PY0 264 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 ITPAQ9BY32 194 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 TTTY12Q9BZ98 90 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 MYNNQ9NPC7 610 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 SIRT5Q9NXA8 310 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 EHD3Q9NZN3 535 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 CNIH4Q9P003 139 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 PLEKHB1Q9UF11 243 aaPredicted RBP11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 PRODH2Q9UF12 536 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 TINAGQ9UJW2 476 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 DTX4Q9Y2E6 619 aa11.96□□□□□ -0.49
CTDSPL2-209ENST00000560620 HIVEP3Q5T1R4 2406 aa11.96□□□□□ -0.5
CTDSPL2-209ENST00000560620 EML6Q6ZMW3 1958 aa11.96□□□□□ -0.5
CTDSPL2-209ENST00000560620 PRRG2O14669 202 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 PIP5K1BO14986 540 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 SKAP2O75563 359 aaPredicted RBP11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 BCAS2O75934 225 aaPredicted RBP11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 TPOP07202 933 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 FGF4P08620 206 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 GP1BBP13224 206 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 S1PR1P21453 382 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 CA7P43166 264 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 SERPINB4P48594 390 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 FBXW4P57775 412 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 RPP38P78345 283 aaKnown RBP11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 RPS6KA2Q15349 733 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 CHI3L2Q15782 390 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 C3AR1Q16581 482 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 BNC2Q6ZN30 1099 aaPredicted RBP11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 IKBIPQ70UQ0 350 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 SIMC1Q8NDZ2 872 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 OR2T11Q8NH01 316 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 PAQR8Q8TEZ7 354 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 METTL2AQ96IZ6 378 aaKnown RBP11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 EGLN2Q96KS0 407 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 TSSK3Q96PN8 268 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 DOHHQ9BU89 302 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 STMN4Q9H169 189 aaPredicted RBP11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 NXF5Q9H1B4 397 aaKnown RBP11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 TUBB1Q9H4B7 451 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 LDAHQ9H6V9 325 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 EXO5Q9H790 373 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 ANKRA2Q9H9E1 313 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 TUBA8Q9NY65 449 aaPredicted RBP11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 BOKQ9UMX3 212 aaPredicted RBP11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 CCL27Q9Y4X3 112 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 FLNBO75369 2602 aaKnown RBP11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 LRRK2Q5S007 2527 aa11.95□□□□□ -0.5
CTDSPL2-209ENST00000560620 ATP6AP2A0A1C7CYW4 349 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 TM9SF1O15321 606 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 AKAP10O43572 662 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 PEX11AO75192 247 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 ATP6AP2O75787 350 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZWINTO95229 277 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 CBX7O95931 251 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 PRPH2P23942 346 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 TACR1P25103 407 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 ABCD3P28288 659 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 PTGS2P35354 604 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 KRT20P35900 424 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 ETV4P43268 484 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 MAGEA5P43359 124 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 PLCXD2Q0VAA5 305 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 MGAT2Q10469 447 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 NTRK2Q16620 822 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 RFTN2Q52LD8 501 aaPredicted RBP11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNF628Q5EBL2 1059 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 CMPK2Q5EBM0 449 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 TMEM198Q66K66 360 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 FAM71E1Q6IPT2 247 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 MTFR2Q6P444 385 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 ARHGAP11AQ6P4F7 1023 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 LYPD8Q6UX82 237 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 LRIG3Q6UXM1 1119 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 C3P1Q6ZMU1 363 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 RGS9BPQ6ZS82 235 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 Q6ZSR9 355 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 FBXW8Q8N3Y1 598 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNF441Q8N8Z8 693 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 ANKRD42Q8N9B4 389 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 C17orf47Q8NEP4 570 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 CLHC1Q8NHS4 586 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 ZNF675Q8TD23 568 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 RELTQ969Z4 430 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 ADIPOR1Q96A54 375 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 CTHRC1Q96CG8 243 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 LCORQ96JN0 433 aaPredicted RBP11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 CCT7Q99832 543 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 IL1RL2Q9HB29 575 aa11.94□□□□□ -0.5
CTDSPL2-209ENST00000560620 SSU72Q9NP77 194 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms